RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 HEXBP07686 556 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 APRTP07741 180 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ANXA5P08758 320 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 PKMP14618 531 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 MST1P26927 711 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 EIF3BP55884 814 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ETF1P62495 437 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ARHGAP19Q14CB8 494 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 PCOLCEQ15113 449 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ANKRD20A4Q4UJ75 823 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 CTSL3PQ5NE16 218 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ABHD17BQ5VST6 288 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ZNF425Q6IV72 752 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 HIBCHQ6NVY1 386 aaPredicted RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 LRRC8BQ6P9F7 803 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 XKRXQ6PP77 449 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 TMEM205Q6UW68 189 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 GDF7Q7Z4P5 450 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 KIAA1328Q86T90 577 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 PAQR7Q86WK9 346 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ARHGEF39Q8N4T4 335 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 CSNK1A1LQ8N752 337 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 OR9A1PQ8NGU1 263 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 SUN3Q8TAQ9 357 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 SMPDL3AQ92484 453 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 MMABQ96EY8 250 aaPredicted RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 IMMP1LQ96LU5 166 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 BIRC8Q96P09 236 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 OR2A5Q96R48 311 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 TUBB6Q9BUF5 446 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ACAT2Q9BWD1 397 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 YIPF2Q9BWQ6 316 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 MRPS30Q9NP92 439 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 UTP6Q9NYH9 597 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 STMN3Q9NZ72 180 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 PAK5Q9P286 719 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 ZNF148Q9UQR1 794 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 TEP1Q99973 2627 aaKnown RBP11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
CARMIL3-204ENST00000561354 IGKV1-8A0A0C4DH67 115 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 H3BMM5 538 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 MYO1CO00159 1063 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 AP3B1O00203 1094 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 FFAR3O14843 346 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 GPR42O15529 346 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 FOXS1O43638 330 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 PRAMEF2O60811 474 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 PSIP1O75475 530 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 F10P00742 488 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 CELA2AP08217 269 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 CYC1P08574 325 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 ITGAMP11215 1152 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 ETS1P14921 441 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 HTR1EP28566 365 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 HSD17B2P37059 387 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 ADARP55265 1226 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 RBPJQ06330 500 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 PRDX1Q06830 199 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 FAM53BQ14153 422 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 HKDC1Q2TB90 917 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 FAAH2Q6GMR7 532 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 ZNF662Q6ZS27 426 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 ZC3H7AQ8IWR0 971 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 TXLNBQ8N3L3 684 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 RERGQ96A58 199 aaPredicted RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 IL22Q9GZX6 179 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 DRC3Q9H069 523 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 SYNPO2LQ9H987 977 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 EIF2B3Q9NR50 452 aaKnown RBP11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 TEKT2Q9UIF3 430 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 PCDHGB6Q9Y5F9 930 aa11.22□□□□□ -0.61
CARMIL3-204ENST00000561354 A0A0A6YYC8 382 aaPredicted RBP11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 A0A0U1RQJ8 604 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 ZNF839A8K0R7 811 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 ARHGEF33A8MVX0 844 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 I3L1I5 382 aaPredicted RBP11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 PFDN6O15212 129 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 NIPSNAP2O75323 286 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 CCNDBP1O95273 360 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 ESR1P03372 595 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 C8orf89P0DMQ9 161 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 AGAP20933 346 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 ARNTP27540 789 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 NMBRP28336 390 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 NPY2RP49146 381 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 CASP6P55212 293 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 SESN2P58004 480 aaPredicted RBP11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 ABATP80404 500 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 TYSND1Q2T9J0 566 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 RNF187Q5TA31 235 aaPredicted RBP11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 ICE2Q659A1 982 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 MRNIPQ6NTE8 343 aa11.21□□□□□ -0.61
CARMIL3-204ENST00000561354 SUSD1Q6UWL2 747 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms