RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ATP6V0D1P61421 351 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 NCF4Q15080 339 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 FAM153CQ494X1 144 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 FAM69BQ5VUD6 431 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 MLIPQ5VWP3 458 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 TBC1D1Q86TI0 1168 aaPredicted RBP19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 RERGQ96A58 199 aaPredicted RBP19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 UBXN10Q96LJ8 280 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 PAFAH2Q99487 392 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 HAUS8Q9BT25 410 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 FUT8Q9BYC5 575 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 TMEM184CQ9NVA4 438 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 IFT80Q9P2H3 777 aaPredicted RBP19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 IKBKGQ9Y6K9 419 aa19.04■□□□□ 0.64
TSPAN3-210ENST00000561277 A0A087WUV0 522 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 HMX2A2RU54 273 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 CDC14CA4D256 554 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 FITM1A5D6W6 292 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 POC1B-GALNT4F8VUJ3 575 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 CAPN1P07384 714 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 NPPBP16860 134 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 GCGRP47871 477 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 DCDP81605 110 aaKnown RBP19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 CDKL1Q00532 357 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 TGFBIQ15582 683 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 OR4D1Q15615 310 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 NKAIN1Q4KMZ8 207 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 PCSK4Q6UW60 755 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 DTWD1Q8N5C7 304 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 METTL27Q8N6F8 245 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 CSNK1A1LQ8N752 337 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 SLC44A1Q8WWI5 657 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 EXT2Q93063 718 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 PTERQ96BW5 349 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 OR2A5Q96R48 311 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 OR4K3Q96R72 315 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 NLNQ9BYT8 704 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 SNX15Q9NRS6 342 aa19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 GPN3Q9UHW5 284 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 SMG1Q96Q15 3661 aaKnown RBP19.03■□□□□ 0.64
TSPAN3-210ENST00000561277 HYKKA2RU49 373 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 DSCR3O14972 297 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 ZNF500O60304 480 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 STATHP02808 62 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 ITGB2P05107 769 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 FURINP09958 794 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 RAB40ALP0C0E4 278 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 HRH2P25021 359 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 CSNK1G2P78368 415 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 DLG1Q12959 904 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 TBR1Q16650 682 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 HKDC1Q2TB90 917 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 DEFB109BQ30KR1 87 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 C18orf21Q32NC0 220 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 GPSM1Q86YR5 675 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 CABS1Q96KC9 395 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 TSNARE1Q96NA8 513 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 ARHGAP9Q9BRR9 750 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 ALG9Q9H6U8 611 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 RNF112Q9ULX5 631 aa19.02■□□□□ 0.64
TSPAN3-210ENST00000561277 FEZF1A0PJY2 475 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 ATXN7O15265 892 aaPredicted RBP19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 HNMTP50135 292 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 SERPINB8P50452 374 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 PMS2P54278 862 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 IRF9Q00978 393 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 IL10RAQ13651 578 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 FAM214AQ32MH5 1076 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 FBXO48Q5FWF7 155 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 SYVN1Q86TM6 617 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 THOC6Q86W42 341 aaKnown RBP19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 KIAA1191Q96A73 305 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 CATSPER2Q96P56 530 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 C17orf62Q9BQA9 187 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 TLK1Q9UKI8 766 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 TCFL5Q9UL49 500 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 RUVBL1Q9Y265 456 aaKnown RBP19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 SLC22A14Q9Y267 594 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 ACOT9Q9Y305 439 aa19.02■□□□□ 0.63
TSPAN3-210ENST00000561277 MED26O95402 600 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 LTA4HP09960 611 aaKnown RBP19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 MYBL2P10244 700 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 TFEBP19484 476 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 ITGAXP20702 1163 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 MSH2P43246 934 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 MEF2AQ02078 507 aaPredicted RBP19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 PRTGQ2VWP7 1150 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 CRTC2Q53ET0 693 aaPredicted RBP19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 SOWAHCQ53LP3 525 aaPredicted RBP19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 CATSPEREQ5SY80 951 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 YOD1Q5VVQ6 348 aaPredicted RBP19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 BORAQ6PGQ7 559 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 TRMT10CQ7L0Y3 403 aaKnown RBP19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 KCTD4Q8WVF5 259 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 SLC5A11Q8WWX8 675 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 NEIL2Q969S2 332 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 RHBDF1Q96CC6 855 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 C10orf90Q96M02 699 aa19.01■□□□□ 0.63
TSPAN3-210ENST00000561277 ENAMQ9NRM1 1142 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms