RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RCN2Q14257 317 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 OR4D1Q15615 310 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 HSP90B2PQ58FF3 399 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 WASHC2DQ5SRD0 308 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 MLIPQ5VWP3 458 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 NXPE4Q6UWF7 544 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 SBSNQ6UWP8 590 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 MBOAT1Q6ZNC8 495 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 CDHR3Q6ZTQ4 885 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 ABHD13Q7L211 337 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 TMPRSS9Q7Z410 1059 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 ASPGQ86U10 573 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 AFAP1L2Q8N4X5 818 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 CCNYL1Q8N7R7 359 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 PTGR2Q8N8N7 351 aaPredicted RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 SRFBP1Q8NEF9 429 aaKnown RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 MYRIPQ8NFW9 859 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 OR2W6PQ8NHA6 318 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 RDH11Q8TC12 318 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 PROKR1Q8TCW9 393 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 HNRNPLLQ8WVV9 542 aaKnown RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 SLC13A3Q8WWT9 602 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 PTCD3Q96EY7 689 aaKnown RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 PAIP2Q9BPZ3 127 aaKnown RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 PITHD1Q9GZP4 211 aaPredicted RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 COPS7BQ9H9Q2 264 aaPredicted RBP10.28□□□□□ -0.76
TPM1-229ENST00000561242 ANKHQ9HCJ1 492 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 PFDN4Q9NQP4 134 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 IGSF5Q9NSI5 407 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 SEMA5BQ9P283 1151 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 XPR1Q9UBH6 696 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 B3GALT1Q9Y5Z6 326 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 SPACA6W5XKT8 324 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 CACNA1EQ15878 2313 aa10.28□□□□□ -0.76
TPM1-229ENST00000561242 H3BQF6 201 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 STX16-NPEPL1H3BU86 382 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 PSMD12O00232 456 aaPredicted RBP10.27□□□□□ -0.77
TPM1-229ENST00000561242 STX16O14662 325 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 ZNF749O43361 778 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 MLYCDO95822 493 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 CHEK2O96017 543 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 OTCP00480 354 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 UQCRHP07919 91 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 MSL3P1P0C860 447 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 ERGP11308 486 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 CPA3P15088 417 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 NPPBP16860 134 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 TCN2P20062 427 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 EEF1DP29692 281 aaKnown RBP10.27□□□□□ -0.77
TPM1-229ENST00000561242 RAP1GDS1P52306 607 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 RELAQ04206 551 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 IFT88Q13099 833 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 CHIT1Q13231 466 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 GTF2H2Q13888 395 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 GRB7Q14451 532 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 DEFB110Q30KQ9 67 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 MFSD4BQ5TF39 518 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 GARNL3Q5VVW2 1013 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 GTF2H2CQ6P1K8 395 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 MED27Q6P2C8 311 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 PRMT9Q6P2P2 845 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 CCDC81Q6ZN84 652 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 TTLL10Q6ZVT0 673 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 CHSY3Q70JA7 882 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 MILR1Q7Z6M3 343 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 CLEC14AQ86T13 490 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 FAM20CQ8IXL6 584 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 C4orf33Q8N1A6 199 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 DNAJC22Q8N4W6 341 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 GALNT6Q8NCL4 622 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 PDPRQ8NCN5 879 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 SNIP1Q8TAD8 396 aaKnown RBP10.27□□□□□ -0.77
TPM1-229ENST00000561242 MCMBPQ9BTE3 642 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 DHRS4Q9BTZ2 278 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 SGPP1Q9BX95 441 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 ROGDIQ9GZN7 287 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 EML4Q9HC35 981 aaKnown RBP10.27□□□□□ -0.77
TPM1-229ENST00000561242 CUTCQ9NTM9 273 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 AHSPQ9NZD4 102 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 PTBP2Q9UKA9 531 aaKnown RBP10.27□□□□□ -0.77
TPM1-229ENST00000561242 PCDHGA11Q9Y5H2 935 aa10.27□□□□□ -0.77
TPM1-229ENST00000561242 LRRK1Q38SD2 2015 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 TDRD6O60522 2096 aaKnown RBP10.26□□□□□ -0.77
TPM1-229ENST00000561242 TRBC2A0A5B9 178 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 ARHGAP10A1A4S6 786 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 C1QTNF9BB2RNN3 333 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 H0YGG7 62 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 PEX12O00623 359 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 NDUFS4O43181 175 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 RFPL1O75677 317 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 C1QTNF9P0C862 333 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 HMOX2P30519 316 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 CRHR1P34998 444 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 GGT5P36269 586 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 DLSTP36957 453 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 ETV5P41161 510 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 HNF4AP41235 474 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 GDF5P43026 501 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 PDX1P52945 283 aa10.26□□□□□ -0.77
TPM1-229ENST00000561242 PRKAA2P54646 552 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms