RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ERRFI1Q9UJM3 462 aaPredicted RBP15.44■□□□□ 0.06
SNX1-213ENST00000561026 NOVA2Q9UNW9 492 aaKnown RBP15.44■□□□□ 0.06
SNX1-213ENST00000561026 DHRS7Q9Y394 339 aa15.44■□□□□ 0.06
SNX1-213ENST00000561026 MDC1Q14676 2089 aaKnown RBP15.44■□□□□ 0.06
SNX1-213ENST00000561026 SMAPO00193 183 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 MAP2K7O14733 419 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 NRDCO43847 1150 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 SYF2O95926 243 aaKnown RBP15.43■□□□□ 0.06
SNX1-213ENST00000561026 MPC1LP0DKB6 136 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 ENO3P13929 434 aaPredicted RBP15.43■□□□□ 0.06
SNX1-213ENST00000561026 EZRP15311 586 aaKnown RBP15.43■□□□□ 0.06
SNX1-213ENST00000561026 SLC1A2P43004 574 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 ABATP80404 500 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 LONRF1Q17RB8 773 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 HKDC1Q2TB90 917 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 GARNL3Q5VVW2 1013 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 ISLR2Q6UXK2 745 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 SPNS2Q8IVW8 549 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 LRRC56Q8IYG6 542 aaPredicted RBP15.43■□□□□ 0.06
SNX1-213ENST00000561026 ARHGEF39Q8N4T4 335 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 NAT8LQ8N9F0 302 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 CALML6Q8TD86 181 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 RERGQ96A58 199 aaPredicted RBP15.43■□□□□ 0.06
SNX1-213ENST00000561026 C8orf44Q96CB5 159 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 SIGLEC10Q96LC7 697 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 LMF1Q96S06 567 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
SNX1-213ENST00000561026 EPS8L2Q9H6S3 715 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 ZNF160Q9HCG1 818 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 C20orf96Q9NUD7 363 aaPredicted RBP15.43■□□□□ 0.06
SNX1-213ENST00000561026 MAD1L1Q9Y6D9 718 aa15.43■□□□□ 0.06
SNX1-213ENST00000561026 TXNDC9O14530 226 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 PRPF4O43172 522 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNX1-213ENST00000561026 ZBTB14O43829 449 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 SLC26A3P40879 764 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 SKIV2L2P42285 1042 aaKnown RBP15.42■□□□□ 0.06
SNX1-213ENST00000561026 TSFMP43897 325 aaKnown RBP15.42■□□□□ 0.06
SNX1-213ENST00000561026 EMP2P54851 167 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 ELOAQ14241 798 aaKnown RBP15.42■□□□□ 0.06
SNX1-213ENST00000561026 ZNF169Q14929 603 aaPredicted RBP15.42■□□□□ 0.06
SNX1-213ENST00000561026 TLR1Q15399 786 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 NDUFAF7Q7L592 441 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 AMER3Q8N944 861 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 CD200R1Q8TD46 325 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 MMABQ96EY8 250 aaPredicted RBP15.42■□□□□ 0.06
SNX1-213ENST00000561026 GPR21Q99679 349 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 YIPF2Q9BWQ6 316 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 PCYOX1Q9UHG3 505 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 FBXO5Q9UKT4 447 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 SLC5A6Q9Y289 635 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 COMMD10Q9Y6G5 202 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 HEATR5BQ9P2D3 2071 aa15.42■□□□□ 0.06
SNX1-213ENST00000561026 A0A1W2PQ72 361 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 A1L4Q6 167 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 IDSB3KWA1 339 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 FFAR3O14843 346 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 GPR42O15529 346 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 FOXS1O43638 330 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 KLHL18O94889 574 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 HAUS5O94927 633 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 LDLRP01130 860 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 COX6A1P12074 109 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 CDC16Q13042 620 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 MFAP5Q13361 173 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 B3GNTL1Q67FW5 361 aaPredicted RBP15.41■□□□□ 0.06
SNX1-213ENST00000561026 LINC00696Q6ZRV3 163 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 KCNMB4Q86W47 210 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 KBTBD2Q8IY47 623 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 CPNE9Q8IYJ1 553 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 CNDP1Q96KN2 507 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 EBNA1BP2Q99848 306 aaKnown RBP15.41■□□□□ 0.06
SNX1-213ENST00000561026 TGIF2Q9GZN2 237 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 DRC3Q9H069 523 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 MKKSQ9NPJ1 570 aaPredicted RBP15.41■□□□□ 0.06
SNX1-213ENST00000561026 ABCF3Q9NUQ8 709 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 C14orf105Q9NVL8 296 aa15.41■□□□□ 0.06
SNX1-213ENST00000561026 A0A0A6YYC8 382 aaPredicted RBP15.4■□□□□ 0.06
SNX1-213ENST00000561026 NSG1A0A0A6YYJ2 146 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 H7BY64 318 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 I3L1I5 382 aaPredicted RBP15.4■□□□□ 0.06
SNX1-213ENST00000561026 PGRMC1O00264 195 aaKnown RBP15.4■□□□□ 0.06
SNX1-213ENST00000561026 EIF3FO00303 357 aaPredicted RBP15.4■□□□□ 0.06
SNX1-213ENST00000561026 HAT1O14929 419 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 ANXA5P08758 320 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 CXCR2P25025 360 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 IMPA1P29218 277 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 MPP1Q00013 466 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 FAM53BQ14153 422 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 HSP90AA5PQ58FG0 334 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 THEMIS2Q5TEJ8 643 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 UBE2R2Q712K3 238 aaPredicted RBP15.4■□□□□ 0.06
SNX1-213ENST00000561026 PIWIL4Q7Z3Z4 852 aaKnown RBP15.4■□□□□ 0.06
SNX1-213ENST00000561026 ADCK2Q7Z695 626 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 PPIL6Q8IXY8 311 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX1-213ENST00000561026 ST6GALNAC3Q8NDV1 305 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 CATSPER1Q8NEC5 780 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 GRHL3Q8TE85 626 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 PSMF1Q92530 271 aa15.4■□□□□ 0.06
SNX1-213ENST00000561026 C5orf34Q96MH7 638 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms