RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TRIM62Q9BVG3 475 aa16■□□□□ 0.15
TPM1-228ENST00000560975 ACOXLQ9NUZ1 547 aa16■□□□□ 0.15
TPM1-228ENST00000560975 CDKN2AIPQ9NXV6 580 aaPredicted RBP16■□□□□ 0.15
TPM1-228ENST00000560975 RRN3P2A6NIE6 340 aa16■□□□□ 0.15
TPM1-228ENST00000560975 TREHO43280 583 aa16■□□□□ 0.15
TPM1-228ENST00000560975 THP07101 528 aa16■□□□□ 0.15
TPM1-228ENST00000560975 ADRA2AP08913 450 aa16■□□□□ 0.15
TPM1-228ENST00000560975 PTPN6P29350 595 aa16■□□□□ 0.15
TPM1-228ENST00000560975 GGT2P36268 569 aa16■□□□□ 0.15
TPM1-228ENST00000560975 IL10RBQ08334 325 aa16■□□□□ 0.15
TPM1-228ENST00000560975 EFEMP1Q12805 493 aa16■□□□□ 0.15
TPM1-228ENST00000560975 DUSP7Q16829 419 aa16■□□□□ 0.15
TPM1-228ENST00000560975 LRIF1Q5T3J3 769 aa16■□□□□ 0.15
TPM1-228ENST00000560975 PAMR1Q6UXH9 720 aa16■□□□□ 0.15
TPM1-228ENST00000560975 NLRP8Q86W28 1048 aa16■□□□□ 0.15
TPM1-228ENST00000560975 NATD1Q8N6N6 113 aa16■□□□□ 0.15
TPM1-228ENST00000560975 LPCAT1Q8NF37 534 aa16■□□□□ 0.15
TPM1-228ENST00000560975 TBC1D20Q96BZ9 403 aa16■□□□□ 0.15
TPM1-228ENST00000560975 MAP6Q96JE9 813 aa16■□□□□ 0.15
TPM1-228ENST00000560975 SERPINB11Q96P15 392 aa16■□□□□ 0.15
TPM1-228ENST00000560975 STMN3Q9NZ72 180 aa16■□□□□ 0.15
TPM1-228ENST00000560975 WWOXQ9NZC7 414 aa16■□□□□ 0.15
TPM1-228ENST00000560975 DNMT3LQ9UJW3 386 aa16■□□□□ 0.15
TPM1-228ENST00000560975 GBF1Q92538 1859 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 A0A1W2PQ72 361 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 CCDC182A6NF36 153 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 NBNO60934 754 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 AOC2O75106 756 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 GPX5O75715 221 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 GLUD1P00367 558 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 ESR1P03372 595 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 OR4Q2P0C623 313 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 PRKACBP22694 351 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 RGRP47804 291 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 OR3A3P47888 321 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 VMACQ2NL98 169 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 FBXO43Q4G163 708 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 OVOS1Q6IE37 1185 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 TMPRSS11AQ6ZMR5 421 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 PRR23CQ6ZRP0 262 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 FLCNQ8NFG4 579 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 ASB15Q8WXK1 588 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 MGLLQ99685 303 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 SNTG1Q9NSN8 517 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 RLIMQ9NVW2 624 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 MS4A12Q9NXJ0 267 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 PPT2Q9UMR5 302 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 MOXD2PA6NHM9 499 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 C2orf81A6NN90 581 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 B3GAT3O94766 335 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 KRT6AP02538 564 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 KRT6BP04259 564 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 ENGP17813 658 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 TNFRSF1BP20333 461 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 RPS19P39019 145 aaKnown RBP15.99■□□□□ 0.15
TPM1-228ENST00000560975 SERINC3Q13530 473 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 ZNF621Q6ZSS3 439 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 MYEOVQ96EZ4 313 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 OLA1Q9NTK5 396 aaKnown RBP15.99■□□□□ 0.15
TPM1-228ENST00000560975 ZNF226Q9NYT6 803 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 RPS6KA6Q9UK32 745 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 OGDHLQ9ULD0 1010 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 BRWD3Q6RI45 1802 aa15.99■□□□□ 0.15
TPM1-228ENST00000560975 PDHXO00330 501 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 MANBAO00462 879 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 CPSF4O95639 269 aaKnown RBP15.98■□□□□ 0.15
TPM1-228ENST00000560975 CBLP22681 906 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 DGKEP52429 567 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 ZNF79Q15937 498 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 SLC39A12Q504Y0 691 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 FAM171BQ6P995 826 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 MBOAT1Q6ZNC8 495 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 BPHLQ86WA6 291 aaPredicted RBP15.98■□□□□ 0.15
TPM1-228ENST00000560975 CCDC28AQ8IWP9 274 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 ZNF683Q8IZ20 524 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 SPERTQ8NA61 448 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 B3GNT7Q8NFL0 401 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 SETD6Q8TBK2 473 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 ASPNQ9BXN1 380 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 BARHL1Q9BZE3 327 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 DUSP12Q9UNI6 340 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 SATB2Q9UPW6 733 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 V9GYH0 126 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 NFKBIEO00221 500 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 CLIC1O00299 241 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 AKR7A2O43488 359 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 POU2F1P14859 743 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 TTPAP49638 278 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 LIMK1P53667 647 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 ITGA1P56199 1179 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 ZXDBP98169 803 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 HOXC5Q00444 222 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 MXD1Q05195 221 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 ZZZ3Q8IYH5 903 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 CFAP52Q8N1V2 620 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 SLC5A8Q8N695 610 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.98■□□□□ 0.15
TPM1-228ENST00000560975 C1orf74Q96LT6 269 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 RIPOR3Q96MK2 946 aa15.98■□□□□ 0.15
TPM1-228ENST00000560975 CCM2Q9BSQ5 444 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms