RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 SNF8Q96H20 258 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 SOX17Q9H6I2 414 aaPredicted RBP17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 ZNF552Q9H707 407 aaPredicted RBP17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 PARVBQ9HBI1 364 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 STOX2Q9P2F5 926 aaPredicted RBP17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 FBXL4Q9UKA2 621 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 ADAMTS6Q9UKP5 1117 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 PYCARDQ9ULZ3 195 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 CHMP2BQ9UQN3 213 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 PDE10AQ9Y233 779 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 RUVBL1Q9Y265 456 aaKnown RBP17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 HS3ST3B1Q9Y662 390 aa17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 MDC1Q14676 2089 aaKnown RBP17.15■□□□□ 0.34
TNFAIP2-206ENST00000560428 CLEC18AA5D8T8 446 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 NDC80O14777 642 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 TTI1O43156 1089 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 FBLP22087 321 aaKnown RBP17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 CCND1P24385 295 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 VARSP26640 1264 aaKnown RBP17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 ITGA8P53708 1063 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 ARL4CP56559 192 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 DSG2Q14126 1118 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 RBBP7Q16576 425 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 TUBB8Q3ZCM7 444 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 PRAMEF13Q5VWM6 474 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 SLC6A19Q695T7 634 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 PAQR3Q6TCH7 311 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 KIRREL2Q6UWL6 708 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 CLEC18BQ6UXF7 455 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 ADCK2Q7Z695 626 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 ARHGEF39Q8N4T4 335 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 CLEC18CQ8NCF0 446 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 STT3BQ8TCJ2 826 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 TM9SF4Q92544 642 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 MIEF2Q96C03 454 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 CFAP36Q96G28 342 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 WDR83Q9BRX9 315 aaKnown RBP17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 TRIM51Q9BSJ1 452 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 CRB3Q9BUF7 120 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 SYNPO2LQ9H987 977 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 PPANQ9NQ55 473 aaKnown RBP17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 TMEM184CQ9NVA4 438 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 CUEDC1Q9NWM3 386 aaPredicted RBP17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 MAP4K5Q9Y4K4 846 aa17.14■□□□□ 0.33
TNFAIP2-206ENST00000560428 HAT1O14929 419 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 ZGLP1P0C6A0 271 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 IL2P60568 153 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 KLC1Q07866 573 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 CBLBQ13191 982 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 PDAP1Q13442 181 aaKnown RBP17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 HKDC1Q2TB90 917 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 FAM45BPQ6NSW5 357 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 SHISA6Q6ZSJ9 500 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 Q8NA96 180 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 GALNT11Q8NCW6 608 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 FAM45AQ8TCE6 357 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 LINGO1Q96FE5 620 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 PWWP2AQ96N64 755 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 SLAMF7Q9NQ25 335 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 ABCF3Q9NUQ8 709 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 C14orf105Q9NVL8 296 aa17.13■□□□□ 0.33
TNFAIP2-206ENST00000560428 KCNE1BA0A087WTH5 132 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 EFCAB8A8MWE9 144 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 H7BY64 318 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 TP73O15350 636 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 VPS4BO75351 444 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 TSPAN12O95859 305 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 HIST1H2AGP0C0S8 130 aaPredicted RBP17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 HIST1H2ADP20671 130 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 FDXRP22570 491 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 ITGA3P26006 1051 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 SLC26A3P40879 764 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 RPS15AP62244 130 aaKnown RBP17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 FAM53BQ14153 422 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 HP1BP3Q5SSJ5 553 aaPredicted RBP17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 HECTD2Q5U5R9 776 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 TRMT10BQ6PF06 316 aaKnown RBP17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 AGTRAPQ6RW13 159 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 OR11G2Q8NGC1 345 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 THAP11Q96EK4 314 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 HIST1H2AHQ96KK5 128 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 PRAP1Q96NZ9 151 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 HIST1H2AJQ99878 128 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 H2AFJQ9BTM1 129 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 MFRPQ9BY79 579 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 DRC3Q9H069 523 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 SLC17A6Q9P2U8 582 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 VPS4AQ9UN37 437 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 VWA7Q9Y334 891 aa17.12■□□□□ 0.33
TNFAIP2-206ENST00000560428 E7ESA3 106 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 MASP2O00187 686 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 PCDH17O14917 1159 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 FANCGO15287 622 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 P2RX6O15547 441 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 ANXA5P08758 320 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 AP1S2P56377 157 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 UBAP2LQ14157 1087 aaKnown RBP17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 INPP5JQ15735 1006 aaPredicted RBP17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 NDUFA9Q16795 377 aa17.11■□□□□ 0.33
TNFAIP2-206ENST00000560428 PHKG1Q16816 387 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms