RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ARSFP54793 590 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 SLC12A2P55011 1212 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 SNRPNP63162 240 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 ABATP80404 500 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 MEF2AQ02078 507 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 C19orf57Q0VDD7 668 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 TSNQ15631 228 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 PPP1R3AQ16821 1122 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 COLEC12Q5KU26 742 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 COX15Q7KZN9 410 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 NKAPQ8N5F7 415 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 CSNK1A1LQ8N752 337 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 LRRN4CLQ8ND94 238 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 MNS1Q8NEH6 495 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 ADAMTS17Q8TE56 1095 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 PDLIM5Q96HC4 596 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 CABS1Q96KC9 395 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 C10orf90Q96M02 699 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 OR2A5Q96R48 311 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 GPR22Q99680 433 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 PHACTR1Q9C0D0 580 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 GPAMQ9HCL2 828 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 GEMIN8Q9NWZ8 242 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 NINJ2Q9NZG7 142 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 ANKMY1Q9P2S6 941 aa14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 RUVBL1Q9Y265 456 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 SMG1Q96Q15 3661 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-211ENST00000559850 SEC16AO15027 2179 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 MED13Q9UHV7 2174 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 SCN3AQ9NY46 2000 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 FEZF1A0PJY2 475 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 PABPN1LA6NDY0 278 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 MASP2O00187 686 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 WISP3O95389 354 aaPredicted RBP14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 STX2P32856 288 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 FOLR3P41439 243 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 CSNK1G2P78368 415 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 POU4F1Q01851 419 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 ATP1A4Q13733 1029 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 SLMAPQ14BN4 828 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 NAA25Q14CX7 972 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 PRTGQ2VWP7 1150 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 MRPL14Q6P1L8 145 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 CMC1Q7Z7K0 106 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 PTRH1Q86Y79 214 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 FBXL8Q96CD0 374 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 ABHD17AQ96GS6 310 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 OR4K3Q96R72 315 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 SGPP1Q9BX95 441 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 TRIM54Q9BYV2 358 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 CTNNAL1Q9UBT7 734 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 CTSFQ9UBX1 484 aa14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 MRPS2Q9Y399 296 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-211ENST00000559850 NCF1BA6NI72 391 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 NCF1CA8MVU1 366 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 PYCARD-AS1I3L0S3 204 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 RECKO95980 971 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 UMODP07911 640 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 CCDC166P0CW27 439 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 NCF1P14598 390 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 NPPBP16860 134 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 ECHS1P30084 290 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 PMS2P54278 862 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 AP1S2P56377 157 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 BMPR2Q13873 1038 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 FBXO48Q5FWF7 155 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 CATSPEREQ5SY80 951 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 GRTP1Q5TC63 336 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 CAPN13Q6MZZ7 669 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 LCTLQ6UWM7 567 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 CYS1Q717R9 158 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 C17orf64Q86WR6 236 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 PRSS58Q8IYP2 241 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 SHISA5Q8N114 240 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 OR56A3Q8NH54 315 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 RERGQ96A58 199 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 COL26A1Q96A83 441 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 TSNARE1Q96NA8 513 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 EGFL8Q99944 293 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 SPNS1Q9H2V7 528 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 SOX17Q9H6I2 414 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 POPDC3Q9HBV1 291 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 TMEM184CQ9NVA4 438 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 TLK1Q9UKI8 766 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 PADI2Q9Y2J8 665 aa14.15□□□□□ -0.14
RABGGTA-211ENST00000559850 KALRNO60229 2985 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 LCMT2O60294 686 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 ACSL3O95573 720 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 TUBB4AP04350 444 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 ENO2P09104 434 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 STMN1P16949 149 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 SPRP35270 261 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 BCL6P41182 706 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 CCL11P51671 97 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 CSHL1Q14406 222 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 OR4D1Q15615 310 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 UAP1Q16222 522 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 FAM214AQ32MH5 1076 aa14.14□□□□□ -0.15
RABGGTA-211ENST00000559850 YOD1Q5VVQ6 348 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms