RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SRRM3A6NNA2 597 aaPredicted RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 MANBAO00462 879 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 HGSO14964 777 aaPredicted RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 CASC3O15234 703 aaKnown RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 CAPN5O15484 640 aaPredicted RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 GDF9O60383 454 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 UGDHO60701 494 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 WFS1O76024 890 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 RPLP0P05388 317 aaKnown RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 PNLIPP16233 465 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 CD22P20273 847 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 MAGP20916 626 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 TGM1P22735 817 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 CXCR2P25025 360 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 HNF4AP41235 474 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 GRIA3P42263 894 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 LSSP48449 732 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 HTR6P50406 440 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 GFERP55789 205 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 CSNK1G2P78368 415 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 CCL7P80098 99 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 GPLD1P80108 840 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 REEP5Q00765 189 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 SLC14A1Q13336 389 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 LAPTM5Q13571 262 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 DDX39BQ13838 428 aaKnown RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 RBBP5Q15291 538 aaKnown RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 TBCCQ15814 346 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 PAGE2BQ5JRK9 111 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 SNAP47Q5SQN1 464 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 MED27Q6P2C8 311 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 FIGLAQ6QHK4 219 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 DBX2Q6ZNG2 339 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 USP53Q70EK8 1073 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 WDR75Q8IWA0 830 aaKnown RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 DDIASQ8IXT1 998 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 KIRREL3Q8IZU9 778 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 KRT78Q8N1N4 520 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 RFWD2Q8NHY2 731 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 CCT6BQ92526 530 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 MTFMTQ96DP5 389 aaKnown RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 WDR34Q96EX3 536 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 FAR2Q96K12 515 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 CCT8L2Q96SF2 557 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 AIF1LQ9BQI0 150 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 EFCAB11Q9BUY7 163 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 NUF2Q9BZD4 464 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 SPNS1Q9H2V7 528 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 EPB41L1Q9H4G0 881 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 EHD1Q9H4M9 534 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 ELOVL6Q9H5J4 265 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 TMEM184CQ9NVA4 438 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 GEMIN8Q9NWZ8 242 aaKnown RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 ATXN7L1Q9ULK2 861 aaPredicted RBP10.03□□□□□ -0.8
TPM1-221ENST00000559831 SNX6Q9UNH7 406 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 PTGDR2Q9Y5Y4 395 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 USH1CQ9Y6N9 552 aa10.03□□□□□ -0.8
TPM1-221ENST00000559831 WDFY4Q6ZS81 3184 aa10.02□□□□□ -0.8
TPM1-221ENST00000559831 IGKV1-8A0A0C4DH67 115 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 A0A0G2JND7 137 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 PROB1E7EW31 1015 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 SLCO1B7G3V0H7 640 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 HAT1O14929 419 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 PIP5K1BO14986 540 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 HDAC3O15379 428 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 OR1F1O43749 312 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 NRP2O60462 931 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 FOXD2O60548 495 aaPredicted RBP10.02□□□□□ -0.81
TPM1-221ENST00000559831 PRAMEF10O60809 474 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 RASSF9O75901 435 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 FKBP9O95302 570 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 TGDSO95455 350 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 KRT6AP02538 564 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 KRT6BP04259 564 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 JUNP05412 331 aaKnown RBP10.02□□□□□ -0.81
TPM1-221ENST00000559831 FGF4P08620 206 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 CKMT2P17540 419 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 HRH2P25021 359 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 CD1CP29017 333 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 CSF2RBP32927 897 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 GRK3P35626 688 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 CASP2P42575 452 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 KRT6CP48668 564 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 HK2P52789 917 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 AQP5P55064 265 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 BTKQ06187 659 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 PCDH1Q08174 1060 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 CYP4F3Q08477 520 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 IFT88Q13099 833 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 CCDC157Q569K6 752 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 VWA5B1Q5TIE3 1220 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 FCRL6Q6DN72 434 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 FAM129CQ86XR2 697 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 PLXDC1Q8IUK5 500 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 PLD3Q8IV08 490 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 TBC1D19Q8N5T2 526 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 ZNF740Q8NDX6 193 aa10.02□□□□□ -0.81
TPM1-221ENST00000559831 ABHD11Q8NFV4 315 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms