RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 WNT5AP41221 380 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 ACAA2P42765 397 aaKnown RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 KCNJ1P48048 391 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 ASCL1P50553 236 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 KCNJ10P78508 379 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 AKAP17AQ02040 695 aaKnown RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 MBTD1Q05BQ5 628 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TRA2AQ13595 282 aaKnown RBP eCLIP3.4□□□□□ -1.87
SPG11-218ENST00000559754 ITGA9Q13797 1035 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 NR1D2Q14995 579 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 DUOXA1Q1HG43 343 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 RNASEH2BQ5TBB1 312 aaKnown RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 CASC4Q6P4E1 433 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 NOTUMQ6P988 496 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 PLXDC2Q6UX71 529 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 MFSD7Q6UXD7 560 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 ZNF497Q6ZNH5 498 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TPRG1Q6ZUI0 275 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 Q75L30 129 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TMEM110Q86TL2 294 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TMEM173Q86WV6 379 aaPredicted RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 SLC5A8Q8N695 610 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 GCSAMQ8N6F7 178 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 SLC38A9Q8NBW4 561 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 UXS1Q8NBZ7 420 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 GMCL1P1Q8NEA9 526 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 NCOA7Q8NI08 942 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 KIAA1524Q8TCG1 905 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 HM13Q8TCT9 377 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 URGCPQ8TCY9 931 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 ZNF473Q8WTR7 871 aaKnown RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 HEXDCQ8WVB3 486 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 RAD54LQ92698 747 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 MUS81Q96NY9 551 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 DDOQ99489 341 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 SEPHS2Q99611 448 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 CRACR2AQ9BSW2 395 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TEX13BQ9BXU2 312 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 WNT5BQ9H1J7 359 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 PIGMQ9H3S5 423 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 MINDY3Q9H8M7 445 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 AKIRIN1Q9H9L7 192 aaPredicted RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 APOBEC3GQ9HC16 384 aaKnown RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 STK26Q9P289 416 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 KLHL9Q9P2J3 617 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 CGNQ9P2M7 1197 aaKnown RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 KIF3AQ9Y496 699 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 TEX264Q9Y6I9 313 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 CLCA3PQ9Y6N3 262 aa3.4□□□□□ -1.87
SPG11-218ENST00000559754 ASTN2O75129 1339 aaPredicted RBP3.4□□□□□ -1.87
SPG11-218ENST00000559754 TRBV2A0A0J9YWF9 115 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 C13orf42A0A1B0GVH6 325 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 RASGRF2O14827 1237 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 ST8SIA3O43173 380 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 NDUFS4O43181 175 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 SELENOFO60613 162 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 TSPAN1O60635 241 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 APBB3O95704 486 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 PLA2G4BP0C869 781 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 CCDC192P0DO97 292 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 IGHV4-38-2P0DP08 117 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 GHRP10912 638 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 MSH3P20585 1137 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 AHCYP23526 432 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 ACAT1P24752 427 aaKnown RBP3.39□□□□□ -1.87
SPG11-218ENST00000559754 ASMTP46597 345 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 TDO2P48775 406 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 PTENP60484 403 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 FAM174BQ3ZCQ3 159 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 NSUN5P2Q63ZY6 315 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 TXNRD3NBQ6F5E7 133 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 FAM53AQ6NSI3 398 aaPredicted RBP3.39□□□□□ -1.87
SPG11-218ENST00000559754 TMEM182Q6ZP80 229 aaPredicted RBP3.39□□□□□ -1.87
SPG11-218ENST00000559754 RBM43Q6ZSC3 357 aaKnown RBP3.39□□□□□ -1.87
SPG11-218ENST00000559754 STXBP4Q6ZWJ1 553 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 NOTCH2NLQ7Z3S9 236 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 ZER1Q7Z7L7 766 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 TLK2Q86UE8 772 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 GBGT1Q8N5D6 347 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 NEK11Q8NG66 645 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 NSMAFQ92636 917 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 SLAMF9Q96A28 289 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 TMEM186Q96B77 213 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 PKP2Q99959 881 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 OSBPL8Q9BZF1 889 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 FN3KQ9H479 309 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 RAD21L1Q9H4I0 556 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 LMAN1LQ9HAT1 526 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 PNPLA3Q9NST1 481 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 SLC38A7Q9NVC3 462 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 DNAJC11Q9NVH1 559 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 TMEM161AQ9NX61 479 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 CCPG1Q9ULG6 757 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 STRAPQ9Y3F4 350 aaKnown RBP3.39□□□□□ -1.87
SPG11-218ENST00000559754 TMEM184BQ9Y519 407 aaPredicted RBP3.39□□□□□ -1.87
SPG11-218ENST00000559754 YIPF1Q9Y548 306 aa3.39□□□□□ -1.87
SPG11-218ENST00000559754 DHX29Q7Z478 1369 aaKnown RBP3.38□□□□□ -1.87
SPG11-218ENST00000559754 A0A1W2PPQ1 181 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 C5orf60A6NFR6 353 aa3.38□□□□□ -1.87
SPG11-218ENST00000559754 DUXAA6NLW8 204 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms