RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 RAB42Q8N4Z0 105 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ABHD11Q8NFV4 315 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 OR4K1Q8NGD4 311 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 SLC5A11Q8WWX8 675 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 GRAMD1AQ96CP6 724 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TLCD1Q96CP7 247 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 PHF21BQ96EK2 531 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TCTN2Q96GX1 697 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ZNF285Q96NJ3 590 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TMEM237Q96Q45 408 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 OR2A5Q96R48 311 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 MACROD1Q9BQ69 325 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 CHRNA10Q9GZZ6 450 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 TMBIM4Q9HC24 238 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 FBXO8Q9NRD0 319 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 SLC39A1Q9NY26 324 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ZNF225Q9UK10 706 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 PCTPQ9UKL6 214 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 MRPS2Q9Y399 296 aaKnown RBP10.44□□□□□ -0.74
TPM1-217ENST00000559108 SCN3AQ9NY46 2000 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ZFHX4Q86UP3 3567 aa10.44□□□□□ -0.74
TPM1-217ENST00000559108 ZNF839A8K0R7 811 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 TMEM150CB9EJG8 249 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 C4orf51C9J302 202 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 TMX2-CTNND1H3BSU7 103 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 COPEO14579 308 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 RGS16O15492 202 aaPredicted RBP10.43□□□□□ -0.74
TPM1-217ENST00000559108 CCNT2O60583 730 aaKnown RBP10.43□□□□□ -0.74
TPM1-217ENST00000559108 STK16O75716 305 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 DLGAP3O95886 979 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 GSTA1P08263 222 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 MSL3P1P0C860 447 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 JMJD7P0C870 316 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 GFAPP14136 432 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 SLC5A2P31639 672 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 ARRB2P32121 409 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 ETV4P43268 484 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 ABATP80404 500 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 REEP5Q00765 189 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 CDC16Q13042 620 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 EIF3IQ13347 325 aaKnown RBP10.43□□□□□ -0.74
TPM1-217ENST00000559108 E2F2Q14209 437 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 PCBP2Q15366 365 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM1-217ENST00000559108 TGIF1Q15583 401 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 HKDC1Q2TB90 917 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 UNC50Q53HI1 259 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 TTMPQ5BVD1 217 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 LCN10Q6JVE6 187 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 KLC3Q6P597 504 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 NXPE4Q6UWF7 544 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 ZYG11AQ6WRX3 759 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 GOLGA7Q7Z5G4 137 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 C17orf64Q86WR6 236 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 MCATQ8IVS2 390 aaKnown RBP10.43□□□□□ -0.74
TPM1-217ENST00000559108 RNF175Q8N4F7 328 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 ANKRD53Q8N9V6 530 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 ARMC2Q8NEN0 867 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 OR52B6Q8NGF0 335 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 TCP10LQ8TDR4 215 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 ZNF483Q8TF39 744 aaPredicted RBP10.43□□□□□ -0.74
TPM1-217ENST00000559108 ATL1Q8WXF7 558 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 SLC22A18Q96BI1 424 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 NXPE2Q96DL1 559 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 PGM2Q96G03 612 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 FAM111AQ96PZ2 611 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 MECRQ9BV79 373 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 PDE7BQ9NP56 450 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 TNFRSF12AQ9NP84 129 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 DNAJC11Q9NVH1 559 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 GEMIN8Q9NWZ8 242 aaKnown RBP10.43□□□□□ -0.74
TPM1-217ENST00000559108 GRID1Q9ULK0 1009 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 PLLPQ9Y342 182 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 PCDHGA3Q9Y5H0 932 aa10.43□□□□□ -0.74
TPM1-217ENST00000559108 KCNE1BA0A087WTH5 132 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 CCDC189A1A4V9 331 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 SYCE1LA8MT33 242 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 H0YGG7 62 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 STX16-NPEPL1H3BU86 382 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 K7EPI3 171 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 UBFD1O14562 309 aaKnown RBP10.42□□□□□ -0.74
TPM1-217ENST00000559108 STX16O14662 325 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 WFS1O76024 890 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 IPO13O94829 963 aaKnown RBP10.42□□□□□ -0.74
TPM1-217ENST00000559108 FKBP9O95302 570 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 S100BP04271 92 aaPredicted RBP10.42□□□□□ -0.74
TPM1-217ENST00000559108 CCND1P24385 295 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 CDH13P55290 713 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 FOXL2P58012 376 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 VSX2P58304 361 aaPredicted RBP10.42□□□□□ -0.74
TPM1-217ENST00000559108 ARF3P61204 181 aaPredicted RBP10.42□□□□□ -0.74
TPM1-217ENST00000559108 NFKB2Q00653 900 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 HYAL2Q12891 473 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 TRAF3Q13114 568 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 DOC2AQ14183 400 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 SLBPQ14493 270 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM1-217ENST00000559108 PDK4Q16654 411 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 TBC1D25Q3MII6 688 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 ZNF385CQ66K41 422 aaPredicted RBP10.42□□□□□ -0.74
TPM1-217ENST00000559108 LRRC70Q7Z2Q7 622 aa10.42□□□□□ -0.74
TPM1-217ENST00000559108 ADCK2Q7Z695 626 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms