RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PRSS21Q9Y6M0 314 aa7.09□□□□□ -1.27
SPG11-213ENST00000558988 TNRC6AQ8NDV7 1962 aaKnown RBP7.09□□□□□ -1.27
SPG11-213ENST00000558988 CCDC162PA2VCL2 907 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 KLHL33A6NCF5 533 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 A6NL46 340 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 BTNL10A8MVZ5 291 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 MIF4GDA9UHW6 222 aaKnown RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 C21orf140B9A014 251 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 OR1I1O60431 355 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 ETS1P14921 441 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 MSNP26038 577 aaKnown RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 PTPN4P29074 926 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 PRDX3P30048 256 aaKnown RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 KRTAP10-11P60412 298 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 MSLNQ13421 630 aaPredicted RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 RAPSNQ13702 412 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 KYNUQ16719 465 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 GPR33Q49SQ1 333 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 C1orf189Q5VU69 101 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 KCTD11Q693B1 232 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 CAPRIN2Q6IMN6 1127 aaKnown RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 LCN10Q6JVE6 187 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 GK5Q6ZS86 529 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 TAX1BP1Q86VP1 789 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 AMIGO1Q86WK6 493 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 TXLNBQ8N3L3 684 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 C2orf73Q8N5S3 287 aaPredicted RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 OTUD6BQ8N6M0 293 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 ENDOVQ8N8Q3 282 aaKnown RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 LMNTD1Q8N9Z9 388 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 SLC38A9Q8NBW4 561 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 OR1L3Q8NH93 324 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 CFAP61Q8NHU2 1237 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 STYXQ8WUJ0 223 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 HEXDCQ8WVB3 486 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 CPT1BQ92523 772 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.08□□□□□ -1.28
SPG11-213ENST00000558988 CDKN2AIPNLQ96HQ2 116 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 OR52A5Q9H2C5 316 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 ACTR5Q9H9F9 607 aaPredicted RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 ACSS2Q9NR19 701 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 SLC2A6Q9UGQ3 507 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 FEZ2Q9UHY8 353 aaPredicted RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 ANAPC2Q9UJX6 822 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 POMT2Q9UKY4 750 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 FARSAQ9Y285 508 aaKnown RBP7.08□□□□□ -1.28
SPG11-213ENST00000558988 KLHL20Q9Y2M5 609 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 PIKFYVEQ9Y2I7 2098 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 LAMA5O15230 3695 aa7.08□□□□□ -1.28
SPG11-213ENST00000558988 CYSRT1A8MQ03 144 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 C2orf74A8MZ97 194 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 GOLGA6L6A8MZA4 724 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 ISM1B1AKI9 464 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 C9J4A7 227 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 E7EQ34 232 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 ZNF185O15231 689 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 PSMD3O43242 534 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 LIASO43766 372 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 AP2A1O95782 977 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 RECKO95980 971 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 GOT2P00505 430 aaKnown RBP7.07□□□□□ -1.28
SPG11-213ENST00000558988 FTH1P02794 183 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 APRTP07741 180 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 ZSCAN5DPP0CG00 497 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 UGT2B7P16662 529 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 OTX2P32243 289 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 GRIA1P42261 906 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 PGDP52209 483 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 PMS2P54278 862 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SESN2P58004 480 aaPredicted RBP7.07□□□□□ -1.28
SPG11-213ENST00000558988 FOXL2P58012 376 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 PRAMEP78395 509 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 BASP1P80723 227 aaKnown RBP7.07□□□□□ -1.28
SPG11-213ENST00000558988 POU4F1Q01851 419 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 HSPA14Q0VDF9 509 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 KLRB1Q12918 225 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SEMA5AQ13591 1074 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 MLIPQ5VWP3 458 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SPESP1Q6UW49 350 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 CDHR3Q6ZTQ4 885 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SYVN1Q86TM6 617 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 LINC00523Q86TU6 105 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 LDB1Q86U70 411 aaPredicted RBP7.07□□□□□ -1.28
SPG11-213ENST00000558988 TMEM139Q8IV31 216 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SYTL1Q8IYJ3 562 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 GPR135Q8IZ08 494 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 CCDC89Q8N998 374 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SLC35B2Q8TB61 432 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SKA2Q8WVK7 121 aaPredicted RBP7.07□□□□□ -1.28
SPG11-213ENST00000558988 ZFPM2Q8WW38 1151 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 HDAC10Q969S8 669 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 LINC00615Q96LM1 132 aaPredicted RBP7.07□□□□□ -1.28
SPG11-213ENST00000558988 SLC25A23Q9BV35 468 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 ING2Q9H160 280 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 MVB12BQ9H7P6 319 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 ARNT2Q9HBZ2 717 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 LZTFL1Q9NQ48 299 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SEMA5BQ9P283 1151 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 SERTAD3Q9UJW9 196 aa7.07□□□□□ -1.28
SPG11-213ENST00000558988 ICKQ9UPZ9 632 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms