RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 AP3B1O00203 1094 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 ALPPP05187 535 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 MLNP12872 115 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 RPA3P35244 121 aaPredicted RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 SKIV2L2P42285 1042 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 PRDX1Q06830 199 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 FAM214AQ32MH5 1076 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 RBM20Q5T481 1227 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 RNASEH2BQ5TBB1 312 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 ZC3H7AQ8IWR0 971 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 ZADH2Q8N4Q0 377 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 PPP4R1Q8TF05 950 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 MIEF2Q96C03 454 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 CABS1Q96KC9 395 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 PWWP2AQ96N64 755 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 LHPPQ9H008 270 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 SEMA3GQ9NS98 782 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 C20orf96Q9NUD7 363 aaPredicted RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 SAMD15Q9P1V8 674 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 ZNF282Q9UDV7 671 aaPredicted RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 NXT1Q9UKK6 140 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 FBXO5Q9UKT4 447 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 DHRS7Q9Y394 339 aa12.88□□□□□ -0.35
VPS18-203ENST00000558855 COPG1Q9Y678 874 aaKnown RBP12.88□□□□□ -0.35
VPS18-203ENST00000558855 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 SDR42E2A6NKP2 422 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 IDSB3KWA1 339 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 HPP00738 406 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 F10P00742 488 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 IGHEP01854 428 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 CATP04040 527 aaKnown RBP12.87□□□□□ -0.35
VPS18-203ENST00000558855 MPC1LP0DKB6 136 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 PIM1P11309 404 aaPredicted RBP12.87□□□□□ -0.35
VPS18-203ENST00000558855 SOX11P35716 441 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 SLC26A3P40879 764 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 CDKN2DP55273 166 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 DSG2Q14126 1118 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 MUM1Q2TAK8 710 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 C4orf17Q53FE4 359 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 HSP90AA5PQ58FG0 334 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 B3GNTL1Q67FW5 361 aaPredicted RBP12.87□□□□□ -0.35
VPS18-203ENST00000558855 ZNF787Q6DD87 383 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 NEK10Q6ZWH5 1172 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 KCNMB4Q86W47 210 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 FBXO15Q8NCQ5 510 aaPredicted RBP12.87□□□□□ -0.35
VPS18-203ENST00000558855 GRHL3Q8TE85 626 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 KCNJ9Q92806 393 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 CNDP1Q96KN2 507 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 AARSD1Q9BTE6 412 aaKnown RBP12.87□□□□□ -0.35
VPS18-203ENST00000558855 SLC29A3Q9BZD2 475 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 KCNF1Q9H3M0 494 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 XAB2Q9HCS7 855 aaKnown RBP12.87□□□□□ -0.35
VPS18-203ENST00000558855 HOMER3Q9NSC5 361 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 IARS2Q9NSE4 1012 aaKnown RBP12.87□□□□□ -0.35
VPS18-203ENST00000558855 PLA2G3Q9NZ20 509 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 TRPC4Q9UBN4 977 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 MAD1L1Q9Y6D9 718 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 CACNA1DQ01668 2161 aa12.87□□□□□ -0.35
VPS18-203ENST00000558855 ITPR2Q14571 2701 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 IGHV1-45A0A0A0MS14 117 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 ANKUB1A6NFN9 424 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 H7BY64 318 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 PHF2O75151 1096 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 WISP2O76076 250 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 IPO13O94829 963 aaKnown RBP12.86□□□□□ -0.35
VPS18-203ENST00000558855 PRR35P0CG20 571 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 ACPPP15309 386 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 PAMP19021 973 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 CARSP49589 748 aaKnown RBP12.86□□□□□ -0.35
VPS18-203ENST00000558855 ST13P50502 369 aaKnown RBP12.86□□□□□ -0.35
VPS18-203ENST00000558855 TBPL1P62380 186 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
VPS18-203ENST00000558855 ARHGAP19Q14CB8 494 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 PCOLCEQ15113 449 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 PHKG1Q16816 387 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 LONRF1Q17RB8 773 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 AGAP7PQ5VUJ5 663 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 PRMT9Q6P2P2 845 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 LANCL3Q6ZV70 420 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 UBE2R2Q712K3 238 aaPredicted RBP12.86□□□□□ -0.35
VPS18-203ENST00000558855 LURAP1LQ8IV03 231 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 RAB42Q8N4Z0 105 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 SIRT6Q8N6T7 355 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 OR9A4Q8NGU2 314 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 DNAJB14Q8TBM8 379 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 MAGEC3Q8TD91 643 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 BRIX1Q8TDN6 353 aaKnown RBP12.86□□□□□ -0.35
VPS18-203ENST00000558855 EEF1AKMT1Q8WVE0 214 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 NACC2Q96BF6 587 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 MMABQ96EY8 250 aaPredicted RBP12.86□□□□□ -0.35
VPS18-203ENST00000558855 PBKQ96KB5 322 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 PRAP1Q96NZ9 151 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 AGAP4Q96P64 663 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 FAM114A2Q9NRY5 505 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms