RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ABHD17BQ5VST6 288 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 NKAIN2Q5VXU1 208 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 RAET1GQ6H3X3 334 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ERAP2Q6P179 960 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 TMEM108Q6UXF1 575 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 RANBP10Q6VN20 620 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 NAPRTQ6XQN6 538 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 EFL1Q7Z2Z2 1120 aaKnown RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 RABEPKQ7Z6M1 372 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 GLRX5Q86SX6 157 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 MPP5Q8N3R9 675 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 FAM71DQ8N9W8 422 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 LMNTD1Q8N9Z9 388 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 BEND2Q8NDZ0 799 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 IPMKQ8NFU5 416 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 OR13C4Q8NGS5 318 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 OR4C6Q8NH72 309 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 NSMCE1Q8WV22 266 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 TFB1MQ8WVM0 346 aaKnown RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 P3H4Q92791 437 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 AP2M1Q96CW1 435 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 NUS1Q96E22 293 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 PRR11Q96HE9 360 aaPredicted RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 COX14Q96I36 57 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ZNF778Q96MU6 729 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 FCRL5Q96RD9 977 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 AIFM2Q9BRQ8 373 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 FICDQ9BVA6 458 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 FRMD8Q9BZ67 464 aaPredicted RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 FAM83DQ9H4H8 585 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ARNT2Q9HBZ2 717 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 SYBUQ9NX95 663 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 TMEM9Q9P0T7 183 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ATXN10Q9UBB4 475 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ANGPTL2Q9UKU9 493 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 SUFUQ9UMX1 484 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 PPP2R2CQ9Y2T4 447 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ARL5AQ9Y689 179 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 APC2O95996 2303 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 BPTFQ12830 3046 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 C1orf232A0A0U1RR37 186 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 EME2A4GXA9 379 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 ZNF487B1APH4 448 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 LMO7DNF2Z398 122 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 APOC4-APOC2K7ER74 178 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SOCS5O75159 536 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 NDST3O95803 873 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 MT-CO3P00414 261 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 APOC2P02655 101 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 CYP2A6P11509 494 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 CKMT1AP12532 417 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 CTSEP14091 401 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 JUPP14923 745 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 PPP3CBP16298 524 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ZFXP17010 805 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 ITGALP20701 1170 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ACP1P24666 158 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ITPKBP27987 946 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 RPL22P35268 128 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 HSPA9P38646 679 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 EIF2S3P41091 472 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 PIK3CBP42338 1070 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 NR2C2P49116 596 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ARRB1P49407 418 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 PDX1P52945 283 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 CTSCP53634 463 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 YPEL5P62699 121 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SHC2P98077 582 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 XIAPP98170 497 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 B4GALNT1Q00973 533 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 CCDC15Q0P6D6 951 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 OVGP1Q12889 678 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 PEX6Q13608 980 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ARHGEF7Q14155 803 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 TFDP2Q14188 446 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 FHL2Q14192 279 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 HLTFQ14527 1009 aaKnown RBP eCLIP4.16□□□□□ -1.74
SPG11-211ENST00000558561 OASLQ15646 514 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 SLC1A5Q15758 541 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SMAD1Q15797 465 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 ATP13A5Q4VNC0 1218 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 CCDC38Q502W7 563 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 PYCR3Q53H96 274 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 RBM20Q5T481 1227 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 CERCAMQ5T4B2 595 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 HENMT1Q5T8I9 393 aaKnown RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 HES3Q5TGS1 186 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 KCTD11Q693B1 232 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 TTC27Q6P3X3 843 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SLC30A9Q6PML9 568 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 CES3Q6UWW8 571 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 Q6YL49 198 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 MACC1Q6ZN28 852 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 FAM83HQ6ZRV2 1179 aaPredicted RBP4.16□□□□□ -1.74
SPG11-211ENST00000558561 USP51Q70EK9 711 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 TAF8Q7Z7C8 310 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 ADGRG6Q86SQ4 1221 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 PARGQ86W56 976 aa4.16□□□□□ -1.74
SPG11-211ENST00000558561 SLC13A5Q86YT5 568 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms