RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 EFCAB7A8K855 629 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 E9PBE3 544 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 KLHL41O60662 606 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 NDUFS3O75489 264 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 VIPP01282 170 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ESR1P03372 595 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 PRB1P04280 392 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 LYNP07948 512 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 F7P08709 466 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 SBK3P0C264 359 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 IDSP22304 550 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 RPS3P23396 243 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM1-212ENST00000558347 ACRV1P26436 265 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 CALRP27797 417 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 CSTF2P33240 577 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM1-212ENST00000558347 CDKN1CP49918 316 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 GFERP55789 205 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 CLCA4Q14CN2 919 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 RBM20Q5T481 1227 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 TMEM220Q6QAJ8 160 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ABRAXAS1Q6UWZ7 409 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 WASH2PQ6VEQ5 465 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 CCDC81Q6ZN84 652 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 FAM83HQ6ZRV2 1179 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 TMEM26Q6ZUK4 368 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 TAS2R42Q7RTR8 314 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ARHGAP22Q7Z5H3 698 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 SERPINA9Q86WD7 417 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 DTX1Q86Y01 620 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 NXPE1Q8N323 547 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 AFAP1L2Q8N4X5 818 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 BEND7Q8N7W2 519 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 BMPERQ8N8U9 685 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 AGBL5Q8NDL9 886 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 CATSPER1Q8NEC5 780 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ACVR1CQ8NER5 493 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 SLC26A7Q8TE54 656 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ZFAND2BQ8WV99 257 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 SLC39A7Q92504 469 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 DLG3Q92796 817 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ELMO2Q96JJ3 720 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 SCYL1Q96KG9 808 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 OR52B2Q96RD2 323 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 TAAR9Q96RI9 348 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 TSC22D3Q99576 134 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 MRPL57Q9BQC6 102 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 P2RY12Q9H244 342 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 MRPL46Q9H2W6 279 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 UCK1Q9HA47 277 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 POPDC3Q9HBV1 291 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 WASH6PQ9NQA3 447 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ZDHHC3Q9NYG2 299 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 KLHL3Q9UH77 587 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 CRLS1Q9UJA2 301 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 PSMD13Q9UNM6 376 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 RUVBL2Q9Y230 463 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 VWA7Q9Y334 891 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 B3GALT1Q9Y5Z6 326 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 CFAP46Q8IYW2 2715 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ATRXP46100 2492 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 SKAP2O75563 359 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 POP7O75817 140 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 WISP3O95389 354 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 UQCRBP14927 111 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 STMN1P16949 149 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 TYRP1P17643 537 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 TFEBP19484 476 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 FDXRP22570 491 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 AKT1P31749 480 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 SLC26A3P40879 764 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 DMPKQ09013 629 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 COL9A2Q14055 689 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 CYLC2Q14093 348 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 NFE2L1Q14494 772 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 LSM12Q3MHD2 195 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 ARL13AQ5H913 290 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 OGFRL1Q5TC84 451 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 TMEM164Q5U3C3 297 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 HECTD2Q5U5R9 776 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 AGAP9Q5VTM2 703 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 KIAA1614Q5VZ46 1190 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 XKR5Q6UX68 686 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 BNC2Q6ZN30 1099 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 DET1Q7L5Y6 550 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 VASH2Q86V25 355 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 AMZ2Q86W34 360 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 FAM129CQ86XR2 697 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 TRIM48Q8IWZ4 208 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 CENPLQ8N0S6 344 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 PGAM4Q8N0Y7 254 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 AVL9Q8NBF6 648 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 KCTD4Q8WVF5 259 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 JPH3Q8WXH2 748 aaPredicted RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 SGF29Q96ES7 293 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 MAELQ96JY0 434 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 BIRC8Q96P09 236 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 GPR78Q96P69 363 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 GBP5Q96PP8 586 aa9.97□□□□□ -0.81
TPM1-212ENST00000558347 ZCCHC2Q9C0B9 1178 aaKnown RBP9.97□□□□□ -0.81
TPM1-212ENST00000558347 B3GNT4Q9C0J1 378 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms