RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ANKRD10Q9NXR5 420 aa5.64□□□□□ -1.51
RTF1-204ENST00000558117 HCN3Q9P1Z3 774 aa5.64□□□□□ -1.51
RTF1-204ENST00000558117 KIAA1456Q9P272 454 aa5.64□□□□□ -1.51
RTF1-204ENST00000558117 NDRG3Q9UGV2 375 aa5.64□□□□□ -1.51
RTF1-204ENST00000558117 ARHGAP26Q9UNA1 814 aa5.64□□□□□ -1.51
RTF1-204ENST00000558117 ABCA4P78363 2273 aa5.64□□□□□ -1.51
RTF1-204ENST00000558117 A0A087X0M5 115 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 TRAV19A0A0A6YYK7 116 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 SMIM28A0A1B0GU29 152 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 A0A1B0GX30 115 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 GAGE10A6NGK3 116 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 EFCAB7A8K855 629 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 HSPB2A8KAH6 182 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 J3KR12 359 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 GTPBP1O00178 669 aaKnown RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 NVLO15381 856 aaKnown RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 TACC1O75410 805 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 TIPRLO75663 272 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 IGHV4-34P06331 123 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 GIMD1P0DJR0 217 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 TFPIP10646 304 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 XBP1P17861 261 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 UGT1A5P35504 534 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 AMTP48728 403 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 UFM1P61960 85 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 ADORA2A-AS1P86434 159 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 YWHAHQ04917 246 aaPredicted RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 RUNX2Q13950 521 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 HSPB2Q16082 182 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 CCNG2Q16589 344 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 BAK1Q16611 211 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 TDRD12Q587J7 1177 aaKnown RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 SERTAD4-AS1Q5TG53 156 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 ZNF324BQ6AW86 544 aaPredicted RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 C8orf82Q6P1X6 216 aaPredicted RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 TMEM81Q6P7N7 255 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 MB21D2Q8IYB1 491 aaPredicted RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 OR4C6Q8NH72 309 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 ZCCHC10Q8TBK6 192 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 NUDCD2Q8WVJ2 157 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 CRYGNQ8WXF5 182 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 ST8SIA4Q92187 359 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 HDAC11Q96DB2 347 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 RNF125Q96EQ8 232 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 RRP36Q96EU6 259 aaKnown RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 SLITRK1Q96PX8 696 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 SEPT5Q99719 369 aaPredicted RBP5.63□□□□□ -1.51
RTF1-204ENST00000558117 SPZ1Q9BXG8 430 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 NUF2Q9BZD4 464 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 RETREG1Q9H6L5 497 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 EBF2Q9HAK2 575 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 TRPC7Q9HCX4 862 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 DEC1Q9P2X7 70 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 HSPB7Q9UBY9 170 aa5.63□□□□□ -1.51
RTF1-204ENST00000558117 DENND4CQ5VZ89 1909 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 ZNF638Q14966 1978 aaKnown RBP5.62□□□□□ -1.51
RTF1-204ENST00000558117 DOCK9Q9BZ29 2069 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 CASC3O15234 703 aaKnown RBP5.62□□□□□ -1.51
RTF1-204ENST00000558117 IPO8O15397 1037 aaKnown RBP5.62□□□□□ -1.51
RTF1-204ENST00000558117 SDC3O75056 442 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 RGS11O94810 467 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 ZNF8P17098 575 aaPredicted RBP5.62□□□□□ -1.51
RTF1-204ENST00000558117 KLK2P20151 261 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 ART1P52961 327 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 TRAF3Q13114 568 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 DMP1Q13316 513 aaPredicted RBP5.62□□□□□ -1.51
RTF1-204ENST00000558117 MEA1Q16626 185 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 SOWAHAQ2M3V2 549 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 ATF7IP2Q5U623 682 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 NADSYN1Q6IA69 706 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 TBC1D26Q86UD7 250 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 STKLD1Q8NE28 680 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 PRCCQ92733 491 aaPredicted RBP5.62□□□□□ -1.51
RTF1-204ENST00000558117 ARSGQ96EG1 525 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 SLCO5A1Q9H2Y9 848 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 PDZD7Q9H5P4 517 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 TMEM51Q9NW97 253 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 NSMCE4AQ9NXX6 385 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 AASSQ9UDR5 926 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 GPR34Q9UPC5 381 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 CYP46A1Q9Y6A2 500 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 STK36Q9NRP7 1315 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 MYOFQ9NZM1 2061 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
RTF1-204ENST00000558117 IGHV4-28A0A0C4DH34 117 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 TLR4O00206 839 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 ACOT8O14734 319 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 CHMP2AO43633 222 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 SORBS2O94875 1100 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 SEMA4FO95754 770 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 MYF6P23409 242 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 ABCD3P28288 659 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 MARCKSP29966 332 aaPredicted RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 FMO4P31512 558 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 SFNP31947 248 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 RPL9P32969 192 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 KRT20P35900 424 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 CLNS1AP54105 237 aaKnown RBP5.61□□□□□ -1.51
RTF1-204ENST00000558117 PRICKLE4Q2TBC4 344 aa5.61□□□□□ -1.51
RTF1-204ENST00000558117 SLC9B1Q4ZJI4 515 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms