RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CXCR2P25025 360 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 TSFMP43897 325 aaKnown RBP13.93□□□□□ -0.18
SHMT2-235ENST00000557740 TAP2Q03519 686 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 PRDX1Q06830 199 aaKnown RBP13.93□□□□□ -0.18
SHMT2-235ENST00000557740 CDC16Q13042 620 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 ZNF169Q14929 603 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-235ENST00000557740 TLR1Q15399 786 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 HKDC1Q2TB90 917 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 VWA2Q5GFL6 755 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 GARNL3Q5VVW2 1013 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 HIST2H2BCQ6DN03 193 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 IGFL2Q6UWQ7 119 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 ISLR2Q6UXK2 745 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 GRK7Q8WTQ7 553 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 ASB11Q8WXH4 323 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 C8orf44Q96CB5 159 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 MMABQ96EY8 250 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-235ENST00000557740 MS4A14Q96JA4 679 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 GPR21Q99679 349 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 EBNA1BP2Q99848 306 aaKnown RBP13.93□□□□□ -0.18
SHMT2-235ENST00000557740 MESP1Q9BRJ9 268 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 DRC3Q9H069 523 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 COMMD10Q9Y6G5 202 aa13.93□□□□□ -0.18
SHMT2-235ENST00000557740 CNTRLQ7Z7A1 2325 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 NSG1A0A0A6YYJ2 146 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 IDSB3KWA1 339 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 FFAR3O14843 346 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 HAT1O14929 419 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 GPR42O15529 346 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 ZBTB14O43829 449 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 HEXBP07686 556 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 MAGEA3P43357 314 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 EMP2P54851 167 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 MPP1Q00013 466 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 EEF1A2Q05639 463 aaKnown RBP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 Q0VFX4 171 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 MFAP5Q13361 173 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 CYP1B1Q16678 543 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 NDUFA9Q16795 377 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 CRB2Q5IJ48 1285 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 B3GNTL1Q67FW5 361 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 ZNF549Q6P9A3 640 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 LINC00696Q6ZRV3 163 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 NDUFAF7Q7L592 441 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 PIWIL4Q7Z3Z4 852 aaKnown RBP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 KCNMB4Q86W47 210 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 KBTBD2Q8IY47 623 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 CPNE9Q8IYJ1 553 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 GABPB2Q8TAK5 448 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 CD200R1Q8TD46 325 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 C5orf34Q96MH7 638 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 OR2A5Q96R48 311 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 TRMT6Q9UJA5 497 aaKnown RBP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 ERRFI1Q9UJM3 462 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-235ENST00000557740 FBXO5Q9UKT4 447 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 SLC5A6Q9Y289 635 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 NTNG1Q9Y2I2 539 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 MED16Q9Y2X0 877 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 DHRS7Q9Y394 339 aa13.92□□□□□ -0.18
SHMT2-235ENST00000557740 NUP210LQ5VU65 1888 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 A0A0A6YYC8 382 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 I3L1I5 382 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 GFYI3L273 518 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 EIF3FO00303 357 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 PCDH17O14917 1159 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 COX6A1P12074 109 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 PGAM1P18669 254 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 FDXRP22570 491 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 SKIV2L2P42285 1042 aaKnown RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 FNTAP49354 379 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 RELAQ04206 551 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 PTK6Q13882 451 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 PPP1R7Q15435 360 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 ATG9BQ674R7 924 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 FAAH2Q6GMR7 532 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 LRRC8EQ6NSJ5 796 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 UBE2R2Q712K3 238 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 PLD3Q8IV08 490 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 PPIL6Q8IXY8 311 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 AMER3Q8N944 861 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 NAT8LQ8N9F0 302 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 ST6GALNAC3Q8NDV1 305 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 BARD1Q99728 777 aaKnown RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 CCDC177Q9NQR7 707 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 RIC8BQ9NVN3 520 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 NEU2Q9Y3R4 380 aa13.91□□□□□ -0.18
SHMT2-235ENST00000557740 UTP20O75691 2785 aaKnown RBP13.91□□□□□ -0.18
SHMT2-235ENST00000557740 DYTNA2CJ06 578 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 P2RX6O15547 441 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 LDLRP01130 860 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 PRR35P0CG20 571 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 HRH2P25021 359 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 IMPA1P29218 277 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 SLC26A3P40879 764 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 AVPR1BP47901 424 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 RGS4P49798 205 aa13.9□□□□□ -0.18
SHMT2-235ENST00000557740 TBPL1P62380 186 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms