RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PRPS1L1P21108 318 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 ACRV1P26436 265 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 CA5AP35218 305 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 GGT2P36268 569 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 SGSHP51688 502 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 NEK2P51955 445 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 IFITM2Q01629 132 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 SRSF11Q05519 484 aaKnown RBP11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 VEZF1Q14119 521 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 GGTA1PQ4G0N0 100 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 THOC7Q6I9Y2 204 aaKnown RBP11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 C16orf59Q7L2K0 433 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 SAPCD2Q86UD0 394 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 ZSWIM9Q86XI8 627 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 CLIP4Q8N3C7 705 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 DNAJC22Q8N4W6 341 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 ZNF675Q8TD23 568 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 CSGALNACT1Q8TDX6 532 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 ATL1Q8WXF7 558 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 APIPQ96GX9 242 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 MYO19Q96H55 970 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 EGLN2Q96KS0 407 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 APOLD1Q96LR9 279 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 KCNC2Q96PR1 638 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 NEK6Q9HC98 313 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 SPASTQ9UBP0 616 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 MKLN1Q9UL63 735 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 PCDHGB3Q9Y5G1 929 aa11.46□□□□□ -0.58
VIPAS39-211ENST00000557658 C1QCP02747 245 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 ACPPP15309 386 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 MAGP20916 626 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 SLC19A1P41440 591 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 RPIAP49247 311 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 BOP1Q14137 746 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 MRPL58Q14197 206 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 CLLU1OSQ5K130 101 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 CDKL4Q5MAI5 379 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 RSBN1Q5VWQ0 802 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 SLX4IPQ5VYV7 408 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 LRRC70Q7Z2Q7 622 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 CPA6Q8N4T0 437 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 GGHQ92820 318 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 HTATIP2Q9BUP3 242 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 ZFYVE1Q9HBF4 777 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 RGS17Q9UGC6 210 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 PCDHGB6Q9Y5F9 930 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 TRBV5-4A0A0C4DH59 114 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 SLC38A8A6NNN8 435 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 NPIPB8E9PQR5 432 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 RGS13O14921 159 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 NBNO60934 754 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 CCNKO75909 580 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 SNX4O95219 450 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 EOMESO95936 686 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 KRT8P05787 483 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 COL6A1P12109 1028 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 AMD1P17707 334 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 GPR17Q13304 367 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 C6orf183Q5T699 404 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 NOXRED1Q6NXP6 359 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 GDPD3Q7L5L3 318 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 SYT12Q8IV01 421 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 C7orf34Q96L11 122 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 COL21A1Q96P44 957 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 DPH2Q9BQC3 489 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 MIR1-1HGQ9H1L0 117 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 TP63Q9H3D4 680 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 AMBNQ9NP70 447 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 FKBP14Q9NWM8 211 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 ADPRHL2Q9NX46 363 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 KCTD5Q9NXV2 234 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 PCDHGA3Q9Y5H0 932 aa11.45□□□□□ -0.58
VIPAS39-211ENST00000557658 KCNE1BA0A087WTH5 132 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 SUV39H1O43463 412 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 TLL1O43897 1013 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 PRMT3O60678 531 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 GJB5O95377 273 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CBSLP0DN79 551 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CORO1AP31146 461 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 RRM2P31350 389 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 GRK5P34947 590 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CBSP35520 551 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 SOX6P35712 828 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 BMPR1AP36894 532 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 UGT2B15P54855 530 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 COPZ1P61923 177 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 OLR1P78380 273 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 DUSP4Q13115 394 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 IQCCQ4KMZ1 466 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 SPANXN2Q5MJ10 180 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 ATXN7L2Q5T6C5 722 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 CXorf57Q6NSI4 855 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 RNF19BQ6ZMZ0 732 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 Q6ZPB1 254 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 STX19Q8N4C7 294 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 PAF1Q8N7H5 531 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 Q8N9G6 341 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 PIH1D2Q8WWB5 315 aa11.44□□□□□ -0.58
VIPAS39-211ENST00000557658 PLD4Q96BZ4 506 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms