RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 LRRC23Q53EV4 343 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 SH2D4BQ5SQS7 431 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 UBAP2Q5T6F2 1119 aaKnown RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 MANEALQ5VSG8 457 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 HHATQ5VTY9 493 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 ACAD10Q6JQN1 1059 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 AAGABQ6PD74 315 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 MEX3BQ6ZN04 569 aaKnown RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 CENPUQ71F23 418 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 NET1Q7Z628 596 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 PCGF5Q86SE9 256 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 FAM131BQ86XD5 332 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 PRIMA1Q86XR5 153 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 PHYKPLQ8IUZ5 450 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 FAM20CQ8IXL6 584 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 KATNAL2Q8IYT4 538 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 DSELQ8IZU8 1212 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 KCT2Q8NC54 265 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 OR8K5Q8NH50 307 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 EXD1Q8NHP7 514 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 UHMK1Q8TAS1 419 aaKnown RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 FAM81AQ8TBF8 368 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 MIPOL1Q8TD10 442 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 SLC20A1Q8WUM9 679 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 FBLIM1Q8WUP2 373 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 CPT1BQ92523 772 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 ZNF75CPQ92670 426 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 RSC1A1Q92681 617 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 ZNF653Q96CK0 615 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 RBM41Q96IZ5 413 aaKnown RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 PCDHB18PQ96TA0 734 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 CENPKQ9BS16 269 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 DHRS4Q9BTZ2 278 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 NUP85Q9BW27 656 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 CADM1Q9BY67 442 aaKnown RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 OSBPL8Q9BZF1 889 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 ENKD1Q9H0I2 346 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 UBE2TQ9NPD8 197 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 ATXN10Q9UBB4 475 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 UBA2Q9UBT2 640 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 EPHA6Q9UF33 1036 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 SHOC2Q9UQ13 582 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 KCNK6Q9Y257 313 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 CORINQ9Y5Q5 1042 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 GMEB1Q9Y692 573 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 SLC30A1Q9Y6M5 507 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 ANKRD12Q6UB98 2062 aa6.59□□□□□ -1.35
SPTLC2-206ENST00000557566 IGHV5-51A0A0C4DH38 117 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 SMIM31A0A1B0GVY4 71 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 TCRBV7S2A1N4TA0A589 114 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 HMX2A2RU54 273 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 C9J4A7 227 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 MASP2O00187 686 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 PSMD11O00231 422 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 PROSCO94903 275 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 PYGLP06737 847 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 PABPC4LP0CB38 370 aaKnown RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 DHRS4L1P0CG22 281 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 CYP2A6P11509 494 aaPredicted RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 ACP5P13686 325 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 XRCC1P18887 633 aaPredicted RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 GCAP28676 217 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 CRABP2P29373 138 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 VIPR1P32241 457 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 HADHAP40939 763 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 KCNJ1P48048 391 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 CSNK1DP48730 415 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 TDGF1P3P51864 188 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 YBEYP58557 167 aaPredicted RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 BPIFB4P59827 614 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 ADORA2A-AS1P86434 159 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 CDK16Q00536 496 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 FMO1Q01740 532 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 FOLH1Q04609 750 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 RBPJQ06330 500 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 NCF4Q15080 339 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 PRKD1Q15139 912 aaPredicted RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 RCN1Q15293 331 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 TMED2Q15363 201 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 KLHL38Q2WGJ6 581 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 PARP15Q460N3 678 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 DNAL1Q4LDG9 190 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 KHDC1Q4VXA5 237 aaKnown RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 PLEKHS1Q5SXH7 462 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 C6orf163Q5TEZ5 329 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 LRRC38Q5VT99 294 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 FAAH2Q6GMR7 532 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 LCN10Q6JVE6 187 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 RPUSD3Q6P087 351 aaKnown RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 AADACL2Q6P093 401 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 FAM198BQ6UWH4 519 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 TRIM72Q6ZMU5 477 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 SPOCD1Q6ZMY3 1216 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 FAM47EQ6ZV65 393 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 Q6ZVL8 140 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 Q71RC1 249 aaPredicted RBP6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 OTOAQ7RTW8 1153 aa6.58□□□□□ -1.36
SPTLC2-206ENST00000557566 HSD11B1LQ7Z5J1 315 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms