RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TLR1Q15399 786 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 SPATS1Q496A3 300 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 TIGD2Q4W5G0 525 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 SPIN4Q56A73 249 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 SAMD4BQ5PRF9 694 aaKnown RBP12.03□□□□□ -0.48
SHMT2-233ENST00000557529 ACSM2BQ68CK6 577 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 NOXRED1Q6NXP6 359 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 SLC30A9Q6PML9 568 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 LAYNQ6UX15 382 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 TMIGD1Q6UXZ0 262 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 PRR23BQ6ZRT6 265 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 FAM129CQ86XR2 697 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 HPS6Q86YV9 775 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 MINDY1Q8N5J2 469 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 C2orf73Q8N5S3 287 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-233ENST00000557529 DPP10Q8N608 796 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 LMNTD1Q8N9Z9 388 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 ABHD11Q8NFV4 315 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 GPBAR1Q8TDU6 330 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 JADE3Q92613 823 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 CXorf40BQ96DE9 158 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 APIPQ96GX9 242 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 APOLD1Q96LR9 279 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 DCLRE1BQ9H816 532 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 NT5DC2Q9H857 520 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 ADA2Q9NZK5 511 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 SCHIP1Q9P0W5 487 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-233ENST00000557529 MAP10Q9P2G4 905 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 THEGQ9P2T0 379 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 MAPRE3Q9UPY8 281 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 POMPQ9Y244 141 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 DLGAP4Q9Y2H0 992 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
SHMT2-233ENST00000557529 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 A6NCN8 305 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 CCNDBP1O95273 360 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 F3P13726 295 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 SDC1P18827 310 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 RPS13P62277 151 aaKnown RBP12.02□□□□□ -0.49
SHMT2-233ENST00000557529 REEP5Q00765 189 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 PRDX1Q06830 199 aaKnown RBP12.02□□□□□ -0.49
SHMT2-233ENST00000557529 NFYCQ13952 458 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 CEACAM7Q14002 265 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 ZNF423Q2M1K9 1284 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 ICE2Q659A1 982 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 ARPINQ7Z6K5 226 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 SLC22A18ASQ8N1D0 253 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 FAM160A2Q8N612 972 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-233ENST00000557529 LINC01555Q8NAE3 123 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 ZFPM2Q8WW38 1151 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 STARD8Q92502 1023 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 VPS33AQ96AX1 596 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 CCDC124Q96CT7 223 aaKnown RBP12.02□□□□□ -0.49
SHMT2-233ENST00000557529 LRRC58Q96CX6 371 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 ORAI3Q9BRQ5 295 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 GPATCH1Q9BRR8 931 aaKnown RBP12.02□□□□□ -0.49
SHMT2-233ENST00000557529 ACAT2Q9BWD1 397 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 CLMPQ9H6B4 373 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 RNPEPL1Q9HAU8 725 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 DMRT3Q9NQL9 472 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 AASDHPPTQ9NRN7 309 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 SIRT5Q9NXA8 310 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 OR6C2Q9NZP2 312 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 ICKQ9UPZ9 632 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 SIT1Q9Y3P8 196 aa12.02□□□□□ -0.49
SHMT2-233ENST00000557529 OR5K4A6NMS3 321 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 FXYD1O00168 92 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 PRPS1L1P21108 318 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 HRH2P25021 359 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 PTX3P26022 381 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-233ENST00000557529 DPP6P42658 865 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 ASMTP46597 345 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 CXCL12P48061 93 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 SLC7A2P52569 658 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 MTAPQ13126 283 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 EIF2B5Q13144 721 aaKnown RBP12.01□□□□□ -0.49
SHMT2-233ENST00000557529 FZD2Q14332 565 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 DPY19L1Q2PZI1 675 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 SLC36A4Q6YBV0 504 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 IQCHQ86VS3 1027 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 PARGQ86W56 976 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 NRROSQ86YC3 692 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 FRMD1Q8N878 549 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 ENDOVQ8N8Q3 282 aaKnown RBP12.01□□□□□ -0.49
SHMT2-233ENST00000557529 MFSD2AQ8NA29 543 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 OR4K1Q8NGD4 311 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 DNAJB8Q8NHS0 232 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 CCL4L1Q8NHW4 92 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 CHTF18Q8WVB6 975 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 SLC13A3Q8WWT9 602 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 LCN9Q8WX39 176 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 TESCQ96BS2 214 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 SLC6A18Q96N87 628 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 SPNS1Q9H2V7 528 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 RHBGQ9H310 441 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 XKR8Q9H6D3 395 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 TMEM181Q9P2C4 612 aa12.01□□□□□ -0.49
SHMT2-233ENST00000557529 ZNF624Q9P2J8 865 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms