RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TFGQ92734 400 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TP53INP1Q96A56 240 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 FKBP10Q96AY3 582 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 NDC1Q9BTX1 674 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 FSD1LQ9BXM9 530 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 MAK16Q9BXY0 300 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 PACSIN1Q9BY11 444 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 WDR12Q9GZL7 423 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CHRNA10Q9GZZ6 450 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 MYLK2Q9H1R3 596 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 FAM96AQ9H5X1 160 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SOX17Q9H6I2 414 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ASB8Q9H765 288 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 WDR54Q9H977 334 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 MRM3Q9HC36 420 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 LMBRD1Q9NUN5 540 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CHMP5Q9NZZ3 219 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 KLHL8Q9P2G9 620 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 UVRAGQ9P2Y5 699 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SAE1Q9UBE0 346 aaPredicted RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CTSFQ9UBX1 484 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 CRLS1Q9UJA2 301 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SH3BGRL2Q9UJC5 107 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 NENFQ9UMX5 172 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 TRIM33Q9UPN9 1127 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 BZW2Q9Y6E2 419 aaKnown RBP5.6□□□□□ -1.51
VPS33B-207ENST00000557470 SPG11Q96JI7 2443 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 NAV3Q8IVL0 2385 aa5.6□□□□□ -1.51
VPS33B-207ENST00000557470 ANKHD1Q8IWZ3 2542 aaKnown RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 TRAV17A0A0B4J275 112 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SLC22A31A6NKX4 558 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 AGAP14A8MT82 685 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 CCL22O00626 93 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 KCNN4O15554 427 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 DIAPH2O60879 1101 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 TMCC2O75069 709 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 ONECUT2O95948 504 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 AGTP01019 485 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 GHRHP01286 108 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 HRGP04196 525 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 KRT1P04264 644 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 H2AFB1P0C5Y9 115 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 H2AFB2P0C5Z0 115 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 PECAM1P16284 738 aaPredicted RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 MAGP20916 626 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 MCM3P25205 808 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 MST1P26927 711 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 PEBP1P30086 187 aaKnown RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SSTR2P30874 369 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SHMT2P34897 504 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SOX18P35713 384 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 CA7P43166 264 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 TNFSF10P50591 281 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 ARG2P78540 354 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 ADORA2A-AS1P86434 159 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 ZBED6P86452 979 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 RPA4Q13156 261 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 MPP3Q13368 585 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 OLIG2Q13516 323 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 MESDQ14696 234 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 CDSNQ15517 529 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 TERF2Q15554 542 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 TAF1AQ15573 450 aaPredicted RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 INAQ16352 499 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 RBBP7Q16576 425 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SLC5A12Q1EHB4 618 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 FILIP1LQ4L180 1135 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 FIGNQ5HY92 759 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 TMEM207Q6UWW9 146 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 RPTNQ6XPR3 784 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 CLEC17AQ6ZS10 378 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 OVCH1Q7RTY7 1134 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 CDH24Q86UP0 819 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 ZNF227Q86WZ6 799 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 EGFL6Q8IUX8 553 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 METTL27Q8N6F8 245 aaPredicted RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 OR13C4Q8NGS5 318 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 TFB1MQ8WVM0 346 aaKnown RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SYN2Q92777 582 aaPredicted RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 DLG3Q92796 817 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 ULK4Q96C45 1275 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 FCRL5Q96RD9 977 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 LMF1Q96S06 567 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 COPS8Q99627 209 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 GORASP1Q9BQQ3 440 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 FICDQ9BVA6 458 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SLC26A1Q9H2B4 701 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 RRAGDQ9NQL2 400 aaPredicted RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 SEMA3GQ9NS98 782 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 EURLQ9NYK6 297 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 PLA2G3Q9NZ20 509 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 NXT1Q9UKK6 140 aaKnown RBP5.59□□□□□ -1.51
VPS33B-207ENST00000557470 PLAGL1Q9UM63 463 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 PLCL2Q9UPR0 1127 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 KLHL20Q9Y2M5 609 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 GPR52Q9Y2T5 361 aa5.59□□□□□ -1.51
VPS33B-207ENST00000557470 ABCA2Q9BZC7 2435 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 FBN3Q75N90 2809 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 IGLV3-16A0A075B6K0 115 aa5.58□□□□□ -1.52
VPS33B-207ENST00000557470 C5orf60A6NFR6 353 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms