RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 FAM110AQ9BQ89 295 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 TUBA1CQ9BQE3 449 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 KIFC3Q9BVG8 833 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 PLSCR4Q9NRQ2 329 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 VPS54Q9P1Q0 977 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 WRAP73Q9P2S5 460 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 FBXO9Q9UK97 447 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 RCOR1Q9UKL0 485 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 TTC7AQ9ULT0 858 aaPredicted RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 AAR2Q9Y312 384 aaKnown RBP3.71□□□□□ -1.82
CHD8-212ENST00000557329 STON1Q9Y6Q2 735 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 SCINQ9Y6U3 715 aa3.71□□□□□ -1.82
CHD8-212ENST00000557329 DOPEY1Q5JWR5 2465 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 ABCA12Q86UK0 2595 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 COL5A1P20908 1838 aaPredicted RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 HELZP42694 1942 aaKnown RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 KLF18A0A0U1RQI7 1052 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 A0A1W2PS18 150 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 WASH3PC4AMC7 463 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 K7ERI5 159 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 SEC14L5O43304 696 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 BUB3O43684 328 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 DIAPH2O60879 1101 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 ODC1P11926 461 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 MAOAP21397 527 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 CDAP32320 146 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 ARL2P36404 184 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 TNFRSF4P43489 277 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 RPL10AP62906 217 aaKnown RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 CTF1Q16619 201 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 PRICKLE4Q2TBC4 344 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 ZNF667Q5HYK9 610 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 SLC46A3Q7Z3Q1 461 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 ERICH1Q86X53 443 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 C4orf19Q8IY42 314 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 CCDC148Q8NFR7 591 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 CREB3L4Q8TEY5 395 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 LRRC15Q8TF66 581 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 DNASE2BQ8WZ79 361 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 PRCCQ92733 491 aaPredicted RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 TANKQ92844 425 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 FAM149B1Q96BN6 582 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 RNF125Q96EQ8 232 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 IFT74Q96LB3 600 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 ZNF578Q96N58 590 aaPredicted RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 ZMAT2Q96NC0 199 aaKnown RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 SLC22A12Q96S37 553 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 EPYCQ99645 322 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 SLC26A6Q9BXS9 759 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 NACA2Q9H009 215 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 ZMYND12Q9H0C1 365 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 C2orf40Q9H1Z8 148 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 EVA1AQ9H8M9 152 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 MKKSQ9NPJ1 570 aaPredicted RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 XPNPEP1Q9NQW7 623 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 CNGB3Q9NQW8 809 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 TAS2R10Q9NYW0 307 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 DEC1Q9P2X7 70 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 UXTQ9UBK9 157 aaPredicted RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 UBA2Q9UBT2 640 aaPredicted RBP3.7□□□□□ -1.82
CHD8-212ENST00000557329 TUBGCP4Q9UGJ1 667 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 POU2F3Q9UKI9 436 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 MYO9AB2RTY4 2548 aa3.7□□□□□ -1.82
CHD8-212ENST00000557329 RELNP78509 3460 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 COL6A6A6NMZ7 2263 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 CACNA1DQ01668 2161 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 KNTC1P50748 2209 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 VPS37CA5D8V6 355 aaPredicted RBP3.69□□□□□ -1.82
CHD8-212ENST00000557329 NEDD8-MDP1E9PL57 170 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 CYB561D2O14569 222 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 SLC9A3R1O14745 358 aaPredicted RBP3.69□□□□□ -1.82
CHD8-212ENST00000557329 PLRG1O43660 514 aaKnown RBP3.69□□□□□ -1.82
CHD8-212ENST00000557329 SLC37A4O43826 429 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 SEC14L2O76054 403 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 SLITRK3O94933 977 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 F9P00740 461 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 POLBP06746 335 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 ZNF883P0CG24 379 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 CSH1P0DML2 217 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 CSH2P0DML3 217 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 MBL2P11226 248 aaPredicted RBP3.69□□□□□ -1.82
CHD8-212ENST00000557329 SFTPCP11686 197 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 AMD1P17707 334 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 ATF6P18850 670 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 ELAVL4P26378 380 aaKnown RBP3.69□□□□□ -1.82
CHD8-212ENST00000557329 CNTFP26441 200 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 OXTRP30559 389 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 ZBED6P86452 979 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 GALNT2Q10471 571 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 ZNF155Q12901 538 aaPredicted RBP3.69□□□□□ -1.82
CHD8-212ENST00000557329 OLIG2Q13516 323 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 ZNF77Q15935 545 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 CCNG2Q16589 344 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 Q6ZTC4 211 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 TPGS1Q6ZTW0 290 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 LSMEM2Q8N112 164 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 LMNTD1Q8N9Z9 388 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 POC1AQ8NBT0 407 aa3.69□□□□□ -1.82
CHD8-212ENST00000557329 NEXN-AS1Q8NBZ9 246 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms