RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 DENND1AQ8TEH3 1009 aa12.22□□□□□ -0.45
PSEN1-219ENST00000556951 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
PSEN1-219ENST00000556951 INSM2Q96T92 566 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-219ENST00000556951 CAPS2Q9BXY5 557 aa12.22□□□□□ -0.45
PSEN1-219ENST00000556951 ILKAPQ9H0C8 392 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-219ENST00000556951 RAD18Q9NS91 495 aa12.22□□□□□ -0.45
PSEN1-219ENST00000556951 INTS10Q9NVR2 710 aaKnown RBP12.22□□□□□ -0.45
PSEN1-219ENST00000556951 MKS1Q9NXB0 559 aa12.22□□□□□ -0.45
PSEN1-219ENST00000556951 MARCH4Q9P2E8 410 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-219ENST00000556951 FKBPLQ9UIM3 349 aa12.22□□□□□ -0.45
PSEN1-219ENST00000556951 CORO1CQ9ULV4 474 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-219ENST00000556951 VPS9D1Q9Y2B5 631 aa12.22□□□□□ -0.45
PSEN1-219ENST00000556951 OR6C74A6NCV1 312 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 GOLGA8RI6L899 631 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 COPEO14579 308 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 TM9SF1O15321 606 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 KCNJ13O60928 360 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CNOT3O75175 753 aaKnown RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 POP7O75817 140 aaKnown RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 ZWINTO95229 277 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 ALDOAP04075 364 aaKnown RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 STSP08842 583 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CHN1P15882 459 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CRABP2P29373 138 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 OTX2P32243 289 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 FOXN2P32314 431 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CRHR1P34998 444 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 MAGEA12P43365 314 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CCT5P48643 541 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 ART1P52961 327 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CTSCP53634 463 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 XIAPP98170 497 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 POU4F1Q01851 419 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CACNG1Q06432 222 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 LTBQ06643 244 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 USP10Q14694 798 aaKnown RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 SSPNQ14714 243 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 TYSND1Q2T9J0 566 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 ATP13A5Q4VNC0 1218 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 AARS2Q5JTZ9 985 aaKnown RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 TMTC4Q5T4D3 741 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 RNF187Q5TA31 235 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CNSTQ6PJW8 725 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 GRHL3Q8TE85 626 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 CLIP3Q96DZ5 547 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 APOPT1Q96IL0 206 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 VPS35Q96QK1 796 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 ACTR5Q9H9F9 607 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 FBXO6Q9NRD1 293 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 INTS9Q9NV88 658 aaKnown RBP12.21□□□□□ -0.45
PSEN1-219ENST00000556951 PSD3Q9NYI0 1048 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 DCDC2Q9UHG0 476 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 SLC39A10Q9ULF5 831 aa12.21□□□□□ -0.45
PSEN1-219ENST00000556951 FAM95CA0A1B0GW59 222 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 NDUFS3O75489 264 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 MTHFD1P11586 935 aaKnown RBP12.2□□□□□ -0.46
PSEN1-219ENST00000556951 RPA3P35244 121 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-219ENST00000556951 PPARGP37231 505 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-219ENST00000556951 SPAM1P38567 509 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 HALP42357 657 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 TTPAP49638 278 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 FOXL2P58012 376 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 GUCY1A3Q02108 690 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 NFE2L1Q14494 772 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 SEMA3AQ14563 771 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 GPR33Q49SQ1 333 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 METRNLQ641Q3 311 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 TAS2R42Q7RTR8 314 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 LDB1Q86U70 411 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-219ENST00000556951 AMZ2Q86W34 360 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 RAB43Q86YS6 212 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 TRAPPC5Q8IUR0 188 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 CARFQ8N187 725 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 ANKRD42Q8N9B4 389 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 RASGEF1AQ8N9B8 481 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 FAR1Q8WVX9 515 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 RELTQ969Z4 430 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 TSPAN17Q96FV3 270 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 TTC1Q99614 292 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 NRTNQ99748 197 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 IL26Q9NPH9 171 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 SNX15Q9NRS6 342 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 AGPAT4Q9NRZ5 378 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 VWA7Q9Y334 891 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 CFAP20Q9Y6A4 193 aaKnown RBP12.2□□□□□ -0.46
PSEN1-219ENST00000556951 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
PSEN1-219ENST00000556951 FLNAP21333 2647 aaKnown RBP12.19□□□□□ -0.46
PSEN1-219ENST00000556951 A0A096LPK6 155 aa12.19□□□□□ -0.46
PSEN1-219ENST00000556951 GLYATL1P3A0A0U1RQE8 302 aa12.19□□□□□ -0.46
PSEN1-219ENST00000556951 TMEM150CB9EJG8 249 aa12.19□□□□□ -0.46
PSEN1-219ENST00000556951 H3BMH7 237 aa12.19□□□□□ -0.46
PSEN1-219ENST00000556951 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-219ENST00000556951 SRP72O76094 671 aaKnown RBP12.19□□□□□ -0.46
PSEN1-219ENST00000556951 GSTA1P08263 222 aa12.19□□□□□ -0.46
PSEN1-219ENST00000556951 F7P08709 466 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms