RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 UNKQ9C0B0 810 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SLC39A8Q9C0K1 460 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 POLR1EQ9GZS1 481 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PCDHAC1Q9H158 963 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ING2Q9H160 280 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SEMA6AQ9H2E6 1030 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 FBXO44Q9H4M3 255 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 GSTO2Q9H4Y5 243 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 COQ10BQ9H8M1 238 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 IL1RL2Q9HB29 575 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PLGRKTQ9HBL7 147 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TREX1Q9NSU2 369 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 DDX18Q9NVP1 670 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 IRAK4Q9NWZ3 460 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CHCHD3Q9NX63 227 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TAS2R13Q9NYV9 303 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM9Q9P0T7 183 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM181Q9P2C4 612 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SLC2A6Q9UGQ3 507 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 EIF2B4Q9UI10 523 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ANAPC2Q9UJX6 822 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 PTBP2Q9UKA9 531 aaKnown RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 AP3M1Q9Y2T2 418 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 Q9Y3F1 56 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 CHST2Q9Y4C5 530 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 ORC6Q9Y5N6 252 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 KAT6AQ92794 2004 aa4.31□□□□□ -1.72
ATXN3-241ENST00000556374 EP300Q09472 2414 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-241ENST00000556374 SETXQ7Z333 2677 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TET1Q8NFU7 2136 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6AP2A0A1C7CYW4 349 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 PRORSD1PA6NEY8 169 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NEMP2A6NFY4 417 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 C2orf81A6NN90 581 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TARM1B6A8C7 271 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 HHLA1C9JL84 531 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 E5RI56 91 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 H3BQ06 376 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 UBXN8O00124 270 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 IFRD1O00458 451 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 PIP5K1BO14986 540 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 VILLO15195 856 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CD3EAPO15446 510 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CLOCKO15516 846 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MSI1O43347 362 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TGM5O43548 720 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TPST1O60507 370 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CBFA2T3O75081 653 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TULP3O75386 442 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NDUFS3O75489 264 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6AP2O75787 350 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 BAIAP3O94812 1187 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 PCDH8O95206 1070 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MATN4O95460 622 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MT-CO1P00395 513 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 SERPINF2P08697 491 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 UMPSP11172 480 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 HSD17B1P14061 328 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 HGFP14210 728 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 AKR1A1P14550 325 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 HOXB6P17509 224 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 HK1P19367 917 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TYMPP19971 482 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6V1B2P21281 511 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 FDXRP22570 491 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MYF6P23409 242 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 EEF1B2P24534 225 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 EEF1DP29692 281 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ADRA1AP35348 466 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 DPP6P42658 865 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 RPS9P46781 194 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ALDH3B2P48448 385 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CSRP3P50461 194 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 SCNN1BP51168 640 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ACLYP53396 1101 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 EEFSECP57772 596 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 PHEXP78562 749 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MS4A2Q01362 244 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 DSC2Q02487 901 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CREB5Q02930 508 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 IL10RBQ08334 325 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MERTKQ12866 999 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 POLD3Q15054 466 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6AP1Q15904 470 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NFE2Q16621 373 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CYP51A1Q16850 503 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 PFKFB4Q16877 469 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZBED5Q49AG3 693 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6AP1LQ52LC2 224 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 FAM98BQ52LJ0 330 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MANEALQ5VSG8 457 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ANKS6Q68DC2 871 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CLEC6AQ6EIG7 209 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MSANTD2Q6P1R3 559 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 KDELC1Q6UW63 502 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 FKBP9P1Q75LS8 142 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 BHLHA9Q7RTU4 235 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TFAP2DQ7Z6R9 452 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF554Q86TJ5 538 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms