RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 POP7O75817 140 aaKnown RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF432O94892 652 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 CDK6Q00534 326 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 DSG2Q14126 1118 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 COQ5Q5HYK3 327 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 PERM1Q5SV97 790 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 RALGPS2Q86X27 583 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 OR2L5Q8NG80 312 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 KCNN1Q92952 543 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 LRRC58Q96CX6 371 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 CD180Q99467 661 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 SLC35A5Q9BS91 424 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 DPEP3Q9H4B8 488 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 MINDY3Q9H8M7 445 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 PADI2Q9Y2J8 665 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 LRRC42Q9Y546 428 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 PARP4Q9UKK3 1724 aaKnown RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 CD72P21854 359 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 AQP1P29972 269 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 GDI1P31150 447 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 DGKEP52429 567 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 CBFBQ13951 182 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 DHCR24Q15392 516 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF792Q3KQV3 632 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ABCA11PQ4W5N1 156 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 CRTC2Q53ET0 693 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 PLEKHG7Q6ZR37 379 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 LRP10Q7Z4F1 713 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 P4HA3Q7Z4N8 544 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ARHGAP12Q8IWW6 846 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 TRAM1L1Q8N609 369 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 PXYLP1Q8TE99 480 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 BRI3BPQ8WY22 251 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 FRMD6Q96NE9 622 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 COL21A1Q96P44 957 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF382Q96SR6 550 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 RAD9AQ99638 391 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 RIOK2Q9BVS4 552 aaKnown RBP10.44□□□□□ -0.74
ACTN1-216ENST00000556083 SFXN1Q9H9B4 322 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 TM9SF3Q9HD45 589 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ADAP2Q9NPF8 381 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 TNFRSF10DQ9UBN6 386 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 B4GALT7Q9UBV7 327 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 ANKRD26Q9UPS8 1709 aa10.44□□□□□ -0.74
ACTN1-216ENST00000556083 C2orf74A8MZ97 194 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 HLA-DQB2P05538 268 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 CYP4B1P13584 511 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 SLC15A1P46059 708 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 CCNHP51946 323 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 RPS21P63220 83 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 MERTKQ12866 999 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 TRAM2Q15035 370 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ANKRD22Q5VYY1 191 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 FOXR1Q6PIV2 292 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 UMODL1-AS1Q8N2C9 162 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 FITM2Q8N6M3 262 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 FLCNQ8NFG4 579 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 OR10H4Q8NGA5 316 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 OR8J3Q8NGG0 315 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 GORASP1Q9BQQ3 440 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 NDRG2Q9UN36 371 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 A0A1W2PRQ8 180 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 FABP12A6NFH5 140 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 A8MT66 165 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 PPEF2O14830 753 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 CAPN5O15484 640 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 MT-ND2P03891 347 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 GLP1RP43220 463 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 PLA2G16P53816 162 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 POU4F2Q12837 409 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 DSC3Q14574 896 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 PRPF38BQ5VTL8 546 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ATG9BQ674R7 924 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 CLEC6AQ6EIG7 209 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 KCTD18Q6PI47 426 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 OLFML1Q6UWY5 402 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 THOC6Q86W42 341 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ZCCHC10Q8TBK6 192 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 OR5P2Q8WZ92 322 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 KLHDC7BQ96G42 594 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 PIWIL1Q96J94 861 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 KXD1Q9BQD3 176 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 UCK2Q9BZX2 261 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 MYNNQ9NPC7 610 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ASB6Q9NWX5 421 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 GPRC5BQ9NZH0 403 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 PHF24Q9UPV7 400 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 BAIAP2Q9UQB8 552 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 U3KQV3 271 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 FAM25EA8MYX2 175 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 NPIPA5E9PKD4 350 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ERI3O43414 337 aaKnown RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 ECI2O75521 394 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 SPATA31D3P0C874 917 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 HOXD8P13378 290 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 UGT2B10P36537 528 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 AP2S1P53680 142 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-216ENST00000556083 GXYLT1Q4G148 440 aa10.43□□□□□ -0.74
ACTN1-216ENST00000556083 XKRXQ6PP77 449 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms