RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ABI3Q9P2A4 366 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ANAPC5Q9UJX4 755 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ZNF148Q9UQR1 794 aa13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SETD2Q9BYW2 2564 aaPredicted RBP13.62□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TCRBV7S3A2A0A539 114 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 KPNA5O15131 536 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GAS8O95995 478 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PTMAP06454 111 aaKnown RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 FDXRP22570 491 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 FMO4P31512 558 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ADARP55265 1226 aaKnown RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MAT1AQ00266 395 aaKnown RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PMP22Q01453 160 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PRDX1Q06830 199 aaKnown RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 HIBCHQ6NVY1 386 aaPredicted RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TTC23LQ6PF05 361 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 RIPOR1Q6ZS17 1223 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CENPUQ71F23 418 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 KIAA1328Q86T90 577 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CSNK1A1LQ8N752 337 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PPFIBP2Q8ND30 876 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MAGEB10Q96LZ2 347 aaPredicted RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PKP4Q99569 1192 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 NPAS2Q99743 824 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 FRMD8P1Q9BZ68 369 aaPredicted RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SYBUQ9NX95 663 aa13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
CHMP4BP1-201ENST00000556017 A0A0A6YYC8 382 aaPredicted RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 DYTNA2CJ06 578 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 OR2W5A6NFC9 320 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 E7ENX8 843 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 E7EVH7 732 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 I3L1I5 382 aaPredicted RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 NDUFS3O75489 264 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 UNC5CO95185 931 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 VAPBO95292 243 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 IPO7O95373 1038 aaKnown RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SLC16A8O95907 504 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MGAT1P26572 445 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CMPK1P30085 196 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CA7P43166 264 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CLCN7P51798 805 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ADORA2A-AS1P86434 159 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TAP2Q03519 686 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 RELAQ04206 551 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 KLHL38Q2WGJ6 581 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GARNL3Q5VVW2 1013 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ICE2Q659A1 982 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 H3F3CQ6NXT2 135 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 GFRALQ6UXV0 394 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 LANCL3Q6ZV70 420 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PRSS41Q7RTY9 318 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 VN1R4Q7Z5H5 301 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PLD3Q8IV08 490 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ZNF480Q8WV37 535 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SKA2Q8WVK7 121 aaPredicted RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SMPDL3AQ92484 453 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MMABQ96EY8 250 aaPredicted RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 BAG1Q99933 345 aaPredicted RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 VN1R1Q9GZP7 353 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 IL22Q9GZX6 179 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 RBSNQ9H1K0 784 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MRPS30Q9NP92 439 aaKnown RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MKKSQ9NPJ1 570 aaPredicted RBP13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 C14orf105Q9NVL8 296 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 RIC8BQ9NVN3 520 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CRYL1Q9Y2S2 319 aa13.6□□□□□ -0.23
CHMP4BP1-201ENST00000556017 IGHV3-20A0A0C4DH32 117 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 OR5H15A6NDH6 313 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 HAT1O14929 419 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PHF2O75151 1096 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 STATHP02808 62 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 PNLIPRP1P54315 467 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 KIF5AQ12840 1032 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ARHGAP19Q14CB8 494 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ZNF630Q2M218 657 aaPredicted RBP13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ANKRD20A4Q4UJ75 823 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CYHR1Q6ZMK1 362 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 ZNF295-AS1Q8N0V1 137 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TRIM8Q9BZR9 551 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 TAC3Q9UHF0 121 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MKL2Q9ULH7 1088 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 SOX13Q9UN79 622 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 CDC14AQ9UNH5 594 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MRFAP1Q9Y605 127 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 NF1P21359 2839 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MED13LQ71F56 2210 aa13.59□□□□□ -0.23
CHMP4BP1-201ENST00000556017 MAN1A2O60476 641 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 PRAMEF2O60811 474 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 AVILO75366 819 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 ESR1P03372 595 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 HEXBP07686 556 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 ERVK-10P10266 1014 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 EZRP15311 586 aaKnown RBP13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 CXCR2P25025 360 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 NPY2RP49146 381 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 ST13P50502 369 aaKnown RBP13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 FAM53BQ14153 422 aa13.58□□□□□ -0.24
CHMP4BP1-201ENST00000556017 CCNG2Q16589 344 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms