RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PLCD4Q9BRC7 762 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 DPH7Q9BTV6 452 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 SEMA6CQ9H3T2 930 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 NPHS2Q9NP85 383 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 C1GALT1Q9NS00 363 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 IRAK4Q9NWZ3 460 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 HAO1Q9UJM8 370 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 APOBEC2Q9Y235 224 aaKnown RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 TRAF6Q9Y4K3 522 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 ASB1Q9Y576 335 aa10.78□□□□□ -0.68
SHMT2-220ENST00000555634 MN1Q10571 1320 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-220ENST00000555634 GOLGA8QA0A0J9YX86 632 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 A0A1W2PPV9 198 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 TRBC2A0A5B9 178 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 GOLGA8OA6NCC3 632 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 URADA6NGE7 173 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 C4orf47A7E2U8 309 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 GOLGA8NF8WBI6 632 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 H0YIV9 168 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SLC28A1O00337 649 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 NDUFAB1O14561 156 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 TOX3O15405 576 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 TNFSF14O43557 240 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ITM2AO43736 263 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SKAP2O75563 359 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 FAM107AO95990 144 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 HSD3B1P14060 373 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ACP1P24666 158 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 HSD3B2P26439 372 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 PRDX3P30048 256 aaKnown RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 CASP2P42575 452 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 OR1D5P58170 312 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SKP1P63208 163 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SH3BP2P78314 561 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 REEP5Q00765 189 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 RGS1Q08116 209 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 PCDH1Q08174 1060 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 TGM3Q08188 693 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 CSTF3Q12996 717 aaKnown RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 DDX39BQ13838 428 aaKnown RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 DOC2AQ14183 400 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 RBBP5Q15291 538 aaKnown RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ZRSR2Q15696 482 aaKnown RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 STPG1Q5TH74 334 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 FRG2Q64ET8 278 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 LETMD1Q6P1Q0 360 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SLCO4C1Q6ZQN7 724 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 FAM92BQ6ZTR7 304 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 RPS27LQ71UM5 84 aaKnown RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SFTPA2Q8IWL1 248 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 LRRC34Q8IZ02 419 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 GBP7Q8N8V2 638 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 DCBLD1Q8N8Z6 715 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 C19orf47Q8N9M1 422 aaKnown RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ABHD11Q8NFV4 315 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SELENOMQ8WWX9 145 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 THAP11Q96EK4 314 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 C19orf60Q96EN9 201 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 WDR34Q96EX3 536 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 TCTN2Q96GX1 697 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 FRG2BQ96QU4 278 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 OR2A14Q96R47 310 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 CAAP1Q9H8G2 361 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ZBTB26Q9HCK0 441 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 PDE7BQ9NP56 450 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SLCO1B3Q9NPD5 702 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ACSS2Q9NR19 701 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 SPHK1Q9NYA1 384 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 KLHL14Q9P2G3 628 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ZNF490Q9ULM2 529 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 TRIM33Q9UPN9 1127 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 USH1CQ9Y6N9 552 aa10.77□□□□□ -0.69
SHMT2-220ENST00000555634 ARID1BQ8NFD5 2236 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-220ENST00000555634 A0A088AWK7 358 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 A0A0G2JND7 137 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 H7BY64 318 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 TXNDC9O14530 226 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 CDX4O14627 284 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-220ENST00000555634 FFAR3O14843 346 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 GPR42O15529 346 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 OR1F1O43749 312 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 DIAPH2O60879 1101 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 RFPL3O75679 317 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 ZBTB11O95625 1053 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-220ENST00000555634 FGF4P08620 206 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 MAGP20916 626 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 ZNF10P21506 573 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-220ENST00000555634 MAPK1P28482 360 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 AHRP35869 848 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 PIK3CBP42338 1070 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 RAP1GDS1P52306 607 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 LIMK1P53667 647 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 ERVPABLB-1P60509 514 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 E2F1Q01094 437 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 NHLH1Q02575 133 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 MAD2L1Q13257 205 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-220ENST00000555634 ATP6AP1LQ52LC2 224 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 CATSPEREQ5SY80 951 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 CACHD1Q5VU97 1274 aa10.76□□□□□ -0.69
SHMT2-220ENST00000555634 CLEC6AQ6EIG7 209 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms