RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 RERGQ96A58 199 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 MVB12AQ96EY5 273 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 RUNDC3BQ96NL0 473 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 OR2A5Q96R48 311 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 CRB3Q9BUF7 120 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 SYNPO2LQ9H987 977 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 CUEDC1Q9NWM3 386 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
PCNX4-209ENST00000555569 CDC14AQ9UNH5 594 aa13.16□□□□□ -0.3
PCNX4-209ENST00000555569 IGLV3-12A0A075B6K2 115 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 TXNDC9O14530 226 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 HAT1O14929 419 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PRPF4O43172 522 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 ALOX12BO75342 701 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 AHSGP02765 367 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 C8GP07360 202 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 ZGLP1P0C6A0 271 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 GNLYP22749 145 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 VARSP26640 1264 aaKnown RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 UQCRFS1P47985 274 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 CARSP49589 748 aaKnown RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 CDKN2DP55273 166 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 KLC1Q07866 573 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 SRSF1Q07955 248 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 HKDC1Q2TB90 917 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PLEKHN1Q494U1 663 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PRR30Q53SZ7 412 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 GARNL3Q5VVW2 1013 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PAQR3Q6TCH7 311 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 IGFL3Q6UXB1 125 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 GALNT7Q86SF2 657 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PALM2Q8IXS6 379 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PRSS58Q8IYP2 241 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PDIK1LQ8N165 341 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 ZADH2Q8N4Q0 377 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 FAM26EQ8N5C1 309 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 OR11G2Q8NGC1 345 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 TM9SF4Q92544 642 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 CERS2Q96G23 380 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 CFAP36Q96G28 342 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 CCDC138Q96M89 665 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 NAPGQ99747 312 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 CCDC177Q9NQR7 707 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 C3orf18Q9UK00 162 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 ADAMTS6Q9UKP5 1117 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 CHMP2BQ9UQN3 213 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 PDE10AQ9Y233 779 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 B3GNT3Q9Y2A9 372 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 COL12A1Q99715 3063 aa13.15□□□□□ -0.3
PCNX4-209ENST00000555569 SPTBN1Q01082 2364 aaKnown RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 SPTAN1Q13813 2472 aaKnown RBP13.15□□□□□ -0.3
PCNX4-209ENST00000555569 SCN3AQ9NY46 2000 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 H7BY64 318 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 SLC16A5O15375 505 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 ANXA5P08758 320 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 HRH2P25021 359 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 ELK3P41970 407 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 TBPL1P62380 186 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 DR1Q01658 176 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 SP140Q13342 867 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 DSG2Q14126 1118 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 VWA2Q5GFL6 755 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 TEDDM1Q5T9Z0 273 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 IRAK1BP1Q5VVH5 260 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 HIBCHQ6NVY1 386 aaPredicted RBP13.14□□□□□ -0.31
PCNX4-209ENST00000555569 CREG2Q8IUH2 290 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PLD3Q8IV08 490 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PARP9Q8IXQ6 854 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 IQCKQ8N0W5 287 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 MYO1HQ8N1T3 1032 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 ARHGEF39Q8N4T4 335 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 ANP32BQ92688 251 aaKnown RBP13.14□□□□□ -0.31
PCNX4-209ENST00000555569 LRRC39Q96DD0 335 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 LINGO1Q96FE5 620 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PWWP2AQ96N64 755 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PRAP1Q96NZ9 151 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 TRIM51Q9BSJ1 452 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 YIPF2Q9BWQ6 316 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PCBD2Q9H0N5 130 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PARVBQ9HBI1 364 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PLAC1Q9HBJ0 212 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
PCNX4-209ENST00000555569 TMEM184CQ9NVA4 438 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 SLC17A6Q9P2U8 582 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 TRPC4Q9UBN4 977 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 SAR1BQ9Y6B6 198 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 HIVEP3Q5T1R4 2406 aa13.14□□□□□ -0.31
PCNX4-209ENST00000555569 USP9YO00507 2555 aaPredicted RBP13.14□□□□□ -0.31
PCNX4-209ENST00000555569 MAP2K7O14733 419 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 P2RX6O15547 441 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 ACPPP15309 386 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 SLC26A3P40879 764 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 PAFAH1B1P43034 410 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 ITGA8P53708 1063 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 ARL4CP56559 192 aa13.13□□□□□ -0.31
PCNX4-209ENST00000555569 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
PCNX4-209ENST00000555569 HIF1AQ16665 826 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms