RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 ARSFP54793 590 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TBPL1P62380 186 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SNRPNP63162 240 aaKnown RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ABATP80404 500 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 POU4F1Q01851 419 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 C19orf57Q0VDD7 668 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 USP10Q14694 798 aaKnown RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HKDC1Q2TB90 917 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 FAM214AQ32MH5 1076 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 C18orf21Q32NC0 220 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SBSNQ6UWP8 590 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RNF44Q7L0R7 432 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NKAPQ8N5F7 415 aaKnown RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TTC29Q8NA56 475 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PROKR1Q8TCW9 393 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RBBP8Q99708 897 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SGPP1Q9BX95 441 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TRIM54Q9BYV2 358 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CCDC177Q9NQR7 707 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ZNF71Q9NQZ8 489 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TXNDC16Q9P2K2 825 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GPN3Q9UHW5 284 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SRPK3Q9UPE1 567 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 POLHQ9Y253 713 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PTRH2Q9Y3E5 179 aaKnown RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 A0A1B0GX78 115 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 FEZF1A0PJY2 475 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ARGFXA6NJG6 315 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 C9J4A7 227 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 K7EM74 188 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MASP2O00187 686 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 DSCR3O14972 297 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CCNDBP1O95273 360 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 WISP3O95389 354 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GP5P40197 560 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CSNK1G2P78368 415 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NFATC3Q12968 1075 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CHAF1BQ13112 559 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 KCNAB2Q13303 367 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TSNQ15631 228 aaKnown RBP11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PPP1R3AQ16821 1122 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PRTGQ2VWP7 1150 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GRTP1Q5TC63 336 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PRAMEF13Q5VWM6 474 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SHISA6Q6ZSJ9 500 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 OVCH1Q7RTY7 1134 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 OR56A3Q8NH54 315 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ADAMTS17Q8TE56 1095 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 FBXL8Q96CD0 374 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ABHD17AQ96GS6 310 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 OR4K3Q96R72 315 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GPR22Q99680 433 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TRIM55Q9BYV6 548 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ENAMQ9NRM1 1142 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TMEM184CQ9NVA4 438 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NINJ2Q9NZG7 142 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ANKMY1Q9P2S6 941 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CTNNAL1Q9UBT7 734 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TLK1Q9UKI8 766 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MAN2B2Q9Y2E5 1009 aa11.85□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CFAP46Q8IYW2 2715 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 P2RX6O15547 441 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CCDC166P0CW27 439 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CDH1P12830 882 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ECHS1P30084 290 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 OTX2P32243 289 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SPRP35270 261 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 KCNC1P48547 511 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CCL11P51671 97 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 AP1S2P56377 157 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MEF2AQ02078 507 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RELAQ04206 551 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GLE1Q53GS7 698 aaKnown RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CPZQ66K79 652 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CAPN13Q6MZZ7 669 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 LCTLQ6UWM7 567 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 COX15Q7KZN9 410 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CMC1Q7Z7K0 106 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 C17orf64Q86WR6 236 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PTRH1Q86Y79 214 aaKnown RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SHISA5Q8N114 240 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CSNK1A1LQ8N752 337 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 LRRN4CLQ8ND94 238 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 COL26A1Q96A83 441 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 C10orf90Q96M02 699 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PCBD2Q9H0N5 130 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SLC25A18Q9H1K4 315 aa11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RUVBL1Q9Y265 456 aaKnown RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MRPS2Q9Y399 296 aaKnown RBP11.84□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ANKRD12Q6UB98 2062 aa11.83□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HMX2A2RU54 273 aa11.83□□□□□ -0.52
TRAPPC6B-205ENST00000555269 NCF1BA6NI72 391 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC6B-205ENST00000555269 NCF1CA8MVU1 366 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms