RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RABL3Q5HYI8 236 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 C10orf62Q5T681 223 aaPredicted RBP8.58□□□□□ -1.04
TDP1-210ENST00000554976 C6orf163Q5TEZ5 329 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 NOXRED1Q6NXP6 359 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 DUS1LQ6P1R4 473 aaKnown RBP8.58□□□□□ -1.04
TDP1-210ENST00000554976 LAYNQ6UX15 382 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 MSANTD1Q6ZTZ1 278 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 NRROSQ86YC3 692 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 ABHD11Q8NFV4 315 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 SLC13A3Q8WWT9 602 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 ZNF717Q9BY31 904 aaPredicted RBP8.58□□□□□ -1.04
TDP1-210ENST00000554976 TRIM8Q9BZR9 551 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 RHBGQ9H310 441 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 PELI2Q9HAT8 420 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 SGK2Q9HBY8 427 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 DMRT3Q9NQL9 472 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 STOML1Q9UBI4 398 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 USP34Q70CQ2 3546 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 PRUNE2Q8WUY3 3088 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 KANSL1LA0AUZ9 987 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 H0Y8X5 98 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 IL6P05231 212 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 VHLP40337 213 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 SGCGQ13326 291 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 FLOT2Q14254 428 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 NFATC4Q14934 902 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 UGT8Q16880 541 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 SPANXN4Q5MJ08 99 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 OGFRL1Q5TC84 451 aaPredicted RBP8.58□□□□□ -1.04
TDP1-210ENST00000554976 CALHM3Q86XJ0 350 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 TMEM126BQ8IUX1 230 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 HID1Q8IV36 788 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 OR8J3Q8NGG0 315 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 FAM110BQ8TC76 370 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 STMN2Q93045 179 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 RAD51AP1Q96B01 352 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 C1QTNF7Q9BXJ2 289 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 NT5DC2Q9H857 520 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 CCDC177Q9NQR7 707 aaPredicted RBP8.58□□□□□ -1.04
TDP1-210ENST00000554976 GID8Q9NWU2 228 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 PSMD13Q9UNM6 376 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 TMEM131Q92545 1883 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 MYO10Q9HD67 2058 aa8.58□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3DA0A087WVF3 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3IA0A087WXS9 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3EA0A087X179 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3KA0A087X1G2 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3FA6NER0 549 aaPredicted RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3LB9A6J9 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 YY2O15391 372 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 DNAJA2O60884 412 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 APBB3O95704 486 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 EML2O95834 649 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 PGRP06401 933 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3HP0C7X1 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 MAT2AP31153 395 aaKnown RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 HSD17B2P37059 387 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ERFP50548 548 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 CLDN2P57739 230 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 REEP5Q00765 189 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 RHDQ02161 417 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 NFYCQ13952 458 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 PRAMEF14Q5SWL7 426 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 CACHD1Q5VU97 1274 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 PRAMEF13Q5VWM6 474 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3GQ6DHY5 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3CQ6IPX1 549 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 WASH2PQ6VEQ5 465 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 SYT13Q7L8C5 426 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TMPRSS11BQ86T26 416 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D3Q8IZP1 549 aaPredicted RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 SLC22A18ASQ8N1D0 253 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 FLVCR1-AS1Q8TAF5 88 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 OR1E3Q8WZA6 343 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 PDXPQ96GD0 296 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 EGLN2Q96KS0 407 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 EFCAB11Q9BUY7 163 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 IKZF5Q9H5V7 419 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ADA2Q9NZK5 511 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 VAPAQ9P0L0 249 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 VPS29Q9UBQ0 182 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ANGPTL2Q9UKU9 493 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 USP22Q9UPT9 525 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ICKQ9UPZ9 632 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ASF1AQ9Y294 204 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 CA5BQ9Y2D0 317 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 KCNE2Q9Y6J6 123 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 SNRNP200O75643 2136 aaKnown RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 PRMT3O60678 531 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 B3GALT4O96024 378 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ACP5P13686 325 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 CD72P21854 359 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 ARL1P40616 181 aaPredicted RBP8.57□□□□□ -1.04
TDP1-210ENST00000554976 PIK3CBP42338 1070 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 GSK3BP49841 420 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 CCR5P51681 352 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 TDGQ13569 410 aa8.57□□□□□ -1.04
TDP1-210ENST00000554976 SLBPQ14493 270 aaKnown RBP eCLIP8.57□□□□□ -1.04
TDP1-210ENST00000554976 RPS6KA2Q15349 733 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms