RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ARL1P40616 181 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CTSOP43234 321 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 PIK3CGP48736 1102 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 HSPA7P48741 367 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 FPGSQ05932 587 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 LMAN2Q12907 356 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 NFATC2Q13469 925 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 GTF2H2Q13888 395 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 DGKKQ5KSL6 1271 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 PTRHD1Q6GMV3 140 aaKnown RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ZCCHC8Q6NZY4 707 aaKnown RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 GTF2H2CQ6P1K8 395 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 IL27RAQ6UWB1 636 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ADAMTSL2Q86TH1 951 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 BBS7Q8IWZ6 715 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 FAM217AQ8IXS0 508 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 STK40Q8N2I9 435 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 METTL6Q8TCB7 284 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ISG20Q96AZ6 181 aaKnown RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 DCSTAMPQ9H295 470 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 TM9SF3Q9HD45 589 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 TMEM45AQ9NWC5 275 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ZMYM5Q9UJ78 669 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CAB39Q9Y376 341 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CCL27Q9Y4X3 112 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 NEUROG3Q9Y4Z2 214 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 METTL15A6NJ78 407 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 BCKDKO14874 412 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ANKRD28O15084 1053 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ZW10O43264 779 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 SLC25A14O95258 325 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 GJA1P17302 382 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CLK1P49759 484 aaKnown RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 OR2B6P58173 313 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CXCR4P61073 352 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 AP1S1P61966 158 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 DEFB103AP81534 67 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 TAGLNQ01995 201 aaKnown RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 PRKCDQ05655 676 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CHRNA6Q15825 494 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 RFTN2Q52LD8 501 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CCNJQ5T5M9 372 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 SPESP1Q6UW49 350 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 RFLNAQ6ZTI6 216 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 TPGS1Q6ZTW0 290 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 NECAB2Q7Z6G3 386 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ZFAND4Q86XD8 727 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ADHFE1Q8IWW8 467 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 TCEAL8Q8IYN2 117 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ADGRG2Q8IZP9 1017 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 EID3Q8N140 333 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 OR5K1Q8NHB7 308 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 CNIH3Q8TBE1 160 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 VPS35Q96QK1 796 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 GORASP2Q9H8Y8 452 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 ATPIF1Q9UII2 106 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
SHMT2-207ENST00000553837 TRBV5-4A0A0C4DH59 114 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 FAM234BA2RU67 622 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 POLR1CO15160 346 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 SNX4O95219 450 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 LATS1O95835 1130 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GNRH1P01148 92 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 CD36P16671 472 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ALOX12P18054 663 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 RPS3P23396 243 aaKnown RBP eCLIP11.88□□□□□ -0.514e-7■■■□□ 16.5
SHMT2-207ENST00000553837 PPP3CCP48454 512 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 STK19P49842 368 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 DGKQP52824 942 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 SLC35A2P78381 396 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 TLE2Q04725 743 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 TRIM60Q495X7 471 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ATP6AP1LQ52LC2 224 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 DLEU7Q6UYE1 221 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 MBOAT1Q6ZNC8 495 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 EFL1Q7Z2Z2 1120 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 SNX20Q7Z614 316 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 LURAP1LQ8IV03 231 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 AMER2Q8N7J2 671 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ZNF689Q96CS4 500 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 TMEM169Q96HH4 297 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 TMEM246Q9BRR3 403 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 C6orf62Q9GZU0 229 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 SMG9Q9H0W8 520 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ABCG8Q9H221 673 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 IPPKQ9H8X2 491 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 CCNB1IP1Q9NPC3 277 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 HEBP1Q9NRV9 189 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 FARSBQ9NSD9 589 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 EXD2Q9NVH0 621 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ZIM2Q9NZV7 527 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 MBD1Q9UIS9 605 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 WBP11Q9Y2W2 641 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 HSPE1-MOB4S4R3N1 261 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ZNF106Q9H2Y7 1883 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms