RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 EME2A4GXA9 379 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 A8MU76 341 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 HAT1O14929 419 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 KIF1CO43896 1103 aaKnown RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 PRAMEF10O60809 474 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 SHOX2O60902 331 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 SH3BGRLO75368 114 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 RASSF9O75901 435 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 ENO1P06733 434 aaKnown RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 TROVE2P10155 538 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 JUPP14923 745 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 CSF2RBP32927 897 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 GRIA3P42263 894 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 GPR3P46089 330 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 NEK2P51955 445 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 CYP4F2P78329 520 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 ABATP80404 500 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 GALNT1Q10472 559 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 SLC5A12Q1EHB4 618 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 TUBB8Q3ZCM7 444 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 STPG1Q5TH74 334 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 KANK2Q63ZY3 851 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 ADNP2Q6IQ32 1131 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 CGB2Q6NT52 195 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 CLYBLQ8N0X4 340 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 RNF175Q8N4F7 328 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 RFWD2Q8NHY2 731 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 PIWIL2Q8TC59 973 aaKnown RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 TWIST2Q8WVJ9 160 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 CCT6BQ92526 530 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 MAP3K3Q99759 626 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 AIF1LQ9BQI0 150 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 NUDT22Q9BRQ3 303 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 NUF2Q9BZD4 464 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 EPN3Q9H201 632 aa13.57□□□□□ -0.24
PRKCH-206ENST00000553830 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 GEMIN8Q9NWZ8 242 aaKnown RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.57□□□□□ -0.24
PRKCH-206ENST00000553830 EP300Q09472 2414 aaPredicted RBP13.56□□□□□ -0.24
PRKCH-206ENST00000553830 KCNE1BA0A087WTH5 132 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 MATN2O00339 956 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 MANBAO00462 879 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 OR1F1O43749 312 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 CHEK2O96017 543 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 JUNP05412 331 aaKnown RBP13.56□□□□□ -0.24
PRKCH-206ENST00000553830 SERPIND1P05546 499 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 UROSP10746 265 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 ST6GAL1P15907 406 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 CKMT2P17540 419 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 CD1CP29017 333 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 SEPHS1P49903 392 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 CSNK1G2P78368 415 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 GPLD1P80108 840 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 REEP5Q00765 189 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 CFHR1Q03591 330 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 IFT88Q13099 833 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 SLC14A1Q13336 389 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 NR1D2Q14995 579 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 HIST2H2ACQ16777 129 aaPredicted RBP13.56□□□□□ -0.24
PRKCH-206ENST00000553830 PAGE2BQ5JRK9 111 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 VWA5B1Q5TIE3 1220 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 LIPJQ5W064 366 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 HIST2H2AA3Q6FI13 130 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 MED27Q6P2C8 311 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 WDR75Q8IWA0 830 aaKnown RBP13.56□□□□□ -0.24
PRKCH-206ENST00000553830 KRT78Q8N1N4 520 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 L3MBTL4Q8NA19 623 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 SELENOMQ8WWX9 145 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 ZDHHC12Q96GR4 267 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 EFCAB11Q9BUY7 163 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 TRIM55Q9BYV6 548 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 LRRN3Q9H3W5 708 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 ELOVL6Q9H5J4 265 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 SOHLH2Q9NX45 425 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 SNX7Q9UNH6 387 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 USH1CQ9Y6N9 552 aa13.56□□□□□ -0.24
PRKCH-206ENST00000553830 A0A0G2JND7 137 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 A0A0J9YVX5 310 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 GOLGA8QA0A0J9YX86 632 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 GOLGA8OA6NCC3 632 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 PROB1E7EW31 1015 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 GOLGA8NF8WBI6 632 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 HGSO14964 777 aaPredicted RBP13.55□□□□□ -0.24
PRKCH-206ENST00000553830 PIP5K1BO14986 540 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 DIAPH2O60879 1101 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 WFS1O76024 890 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 SNUPNO95149 360 aaKnown RBP13.55□□□□□ -0.24
PRKCH-206ENST00000553830 PDYNP01213 254 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 KRT6AP02538 564 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 KRT6BP04259 564 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 LINC00032P0C843 101 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 PNLIPP16233 465 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 GRK3P35626 688 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 HNF4AP41235 474 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms