RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SIM2Q14190 667 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-210ENST00000553693 UGT3A2Q3SY77 523 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 ARHGAP22Q7Z5H3 698 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 TMPRSS11BQ86T26 416 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 METTL4Q8N3J2 472 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 NME8Q8N427 588 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 OR10S1Q8NGN2 331 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 SYN2Q92777 582 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-210ENST00000553693 C4orf45Q96LM5 186 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 SPAG5Q96R06 1193 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 LGMNQ99538 433 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 LPAR4Q99677 370 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 CHCHD6Q9BRQ6 235 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 NYXQ9GZU5 481 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 OPA3Q9H6K4 179 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 Q9N2K0 584 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 PADI2Q9Y2J8 665 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 CLIP1P30622 1438 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 FAM135BQ49AJ0 1406 aa3.24□□□□□ -1.89
SCFD1-210ENST00000553693 RNF17Q9BXT8 1623 aaKnown RBP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 IGLV3-10A0A075B6K4 115 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 FEZF1A0PJY2 475 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ANKRD18BA2A2Z9 1011 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 A6NCN8 305 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 TFECO14948 347 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ARPC2O15144 300 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ADAMDEC1O15204 470 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 FIBPO43427 364 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 BCL2L11O43521 198 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 PLXNC1O60486 1568 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 DOK2O60496 412 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 DANCRP0C864 163 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 THEGLP0DJG4 465 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ITIH1P19827 911 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 CAPN3P20807 821 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 PTGER4P35408 488 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 MTHFRP42898 656 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ZNF75DP51815 510 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 LIMK2P53671 638 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 EIF5P55010 431 aaKnown RBP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 CSNK2BP67870 215 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 CHAF1BQ13112 559 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 KCTD2Q14681 263 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 PCLAFQ15004 111 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 CES4AQ5XG92 561 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ITPRIPL1Q6GPH6 555 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 MZT2BQ6NZ67 158 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 C1orf122Q6ZSJ8 110 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 SLC47A2Q86VL8 602 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 MMD2Q8IY49 270 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 TDRD5Q8NAT2 981 aaKnown RBP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 SLC37A3Q8NCC5 494 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ATL1Q8WXF7 558 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ZNF622Q969S3 477 aaKnown RBP eCLIP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 THOC1Q96FV9 657 aaKnown RBP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 MIA2Q96PC5 1412 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 PUS3Q9BZE2 481 aaKnown RBP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 B3GAT2Q9NPZ5 323 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 GIMAP4Q9NUV9 329 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ABT1Q9ULW3 272 aaKnown RBP3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ATP7AQ04656 1500 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 SYCP2Q9BX26 1530 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 ADAMTS9Q9P2N4 1935 aa3.23□□□□□ -1.89
SCFD1-210ENST00000553693 DEPDC5O75140 1603 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 PREX2Q70Z35 1606 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 UGGT1Q9NYU2 1555 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 ACOD1A6NK06 481 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 PI4K2BG5E9Z4 385 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TEX28O15482 410 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TIMM44O43615 452 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 CEACAM4O75871 244 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TOMM70O94826 608 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 SMIM18P0DKX4 95 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 RPL35AP18077 110 aaKnown RBP3.22□□□□□ -1.89
SCFD1-210ENST00000553693 RXRGP48443 463 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 CDH13P55290 713 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 KRTAP12-2P59991 146 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 MYL7Q01449 175 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 EPS8Q12929 822 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 PRKG2Q13237 762 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 CDH18Q13634 790 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TAB1Q15750 504 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 LEKR1Q6ZMV7 388 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-210ENST00000553693 ZER1Q7Z7L7 766 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 LGI2Q8N0V4 545 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TAGAPQ8N103 731 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 NDUFAF2Q8N183 169 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 MINDY1Q8N5J2 469 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 THAP8Q8NA92 274 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 APPL2Q8NEU8 664 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 OR5T2Q8NGG2 359 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 PRPF31Q8WWY3 499 aaKnown RBP3.22□□□□□ -1.89
SCFD1-210ENST00000553693 NUDT16L1Q9BRJ7 211 aaKnown RBP3.22□□□□□ -1.89
SCFD1-210ENST00000553693 HOXD1Q9GZZ0 328 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TBC1D22BQ9NU19 505 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 HAUS2Q9NVX0 235 aa3.22□□□□□ -1.89
SCFD1-210ENST00000553693 PA2G4Q9UQ80 394 aaKnown RBP3.22□□□□□ -1.89
SCFD1-210ENST00000553693 TMED3Q9Y3Q3 217 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms