RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 MRRFQ96E11 262 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 EFCAB11Q9BUY7 163 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ACAT2Q9BWD1 397 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 PARD6BQ9BYG5 372 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 SPRY4Q9C004 299 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 IQCGQ9H095 443 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 NT5DC2Q9H857 520 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 CAB39LQ9H9S4 337 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 GPN2Q9H9Y4 310 aaPredicted RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 DNAJC11Q9NVH1 559 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ARGLU1Q9NWB6 273 aaPredicted RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 OPTCQ9UBM4 332 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ADAMTS6Q9UKP5 1117 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 GRID1Q9ULK0 1009 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 PCDHGA6Q9Y5G7 932 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 SEC16AO15027 2179 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 KIF26BQ2KJY2 2108 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 A0A1B0GX78 115 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 TRBC2A0A5B9 178 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 CCDC151A5D8V7 595 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 GOLGA6L10A6NI86 522 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SRRM3A6NNA2 597 aaPredicted RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SUPT3HB4E1H0 165 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 STX16-NPEPL1H3BU86 382 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 MEN1O00255 615 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 STX16O14662 325 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SUPT3HO75486 399 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 FAM153BP0C7A2 387 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SFTPCP11686 197 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 EPB42P16452 691 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 PEBP1P30086 187 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 STAT5AP42229 794 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 AVPR1BP47901 424 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 PPP1CAP62136 330 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 VSNL1P62760 191 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SH3BP2P78314 561 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 PCDH1Q08174 1060 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 VAC14Q08AM6 782 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 CDC16Q13042 620 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 RCN2Q14257 317 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 HERC3Q15034 1050 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 GPR19Q15760 415 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 TBCCQ15814 346 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 PDK4Q16654 411 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 ERCC6LQ2NKX8 1250 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 PTCHD3Q3KNS1 767 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 CCDC153Q494R4 210 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 FAM153CQ494X1 144 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 CCSMST1Q4G0I0 132 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 KIAA1614Q5VZ46 1190 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 TMEM207Q6UWW9 146 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 TAX1BP1Q86VP1 789 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 THOC6Q86W42 341 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 PAQR7Q86WK9 346 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 MARCH9Q86YJ5 346 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SPACA3Q8IXA5 215 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 LRRC56Q8IYG6 542 aaPredicted RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 OR4K1Q8NGD4 311 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 AENQ8WTP8 325 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 UBTD2Q8WUN7 234 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SNRNP27Q8WVK2 155 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 ANKRD49Q8WVL7 239 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 NKD1Q969G9 470 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 FKBP10Q96AY3 582 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC45A3Q96JT2 553 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SCYL1Q96KG9 808 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 ZNF285Q96NJ3 590 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 DCBLD2Q96PD2 775 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 CTRCQ99895 268 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 TMEM109Q9BVC6 243 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 CD244Q9BZW8 370 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 DRC3Q9H069 523 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 ATG10Q9H0Y0 220 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 ALG9Q9H6U8 611 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 LHX9Q9NQ69 397 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 NDOR1Q9UHB4 597 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 PTBP2Q9UKA9 531 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 G3BP2Q9UN86 482 aaKnown RBP9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 RAXQ9Y2V3 346 aa9.84□□□□□ -0.83
TRAFD1-208ENST00000552890 COL27A1Q8IZC6 1860 aaPredicted RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 TEX51A0A1B0GUA7 166 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 A0A1W2PNU3 283 aaPredicted RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 H7BY64 318 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 K7EPI3 171 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 DSCR3O14972 297 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 ZNF749O43361 778 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 GLRA3O75311 464 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 FAM155BO75949 473 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 WDR47O94967 919 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 ITGB2P05107 769 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 PVRP15151 417 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 HSD17B3P37058 310 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 HNF4AP41235 474 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 CASP2P42575 452 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 SLC6A12P48065 614 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 CSRP3P50461 194 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 STXBP1P61764 594 aaKnown RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 AP2B1P63010 937 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 RHDQ02161 417 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms