RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CSTF2P33240 577 aaKnown RBP eCLIP9.61□□□□□ -0.87
LETMD1-234ENST00000552645 ARL4DP49703 201 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 RAB28P51157 221 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 GABREP78334 506 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 ZFP36L1Q07352 338 aaKnown RBP9.61□□□□□ -0.87
LETMD1-234ENST00000552645 TBL3Q12788 808 aaKnown RBP9.61□□□□□ -0.87
LETMD1-234ENST00000552645 SQSTM1Q13501 440 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 CLPPQ16740 277 aaPredicted RBP9.61□□□□□ -0.87
LETMD1-234ENST00000552645 PDCD4Q53EL6 469 aaKnown RBP9.61□□□□□ -0.87
LETMD1-234ENST00000552645 LRRC8EQ6NSJ5 796 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 DHRS4L2Q6PKH6 230 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 RINLQ6ZS11 566 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 NEK10Q6ZWH5 1172 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 CMC1Q7Z7K0 106 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 SATL1Q86VE3 508 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 SCUBE1Q8IWY4 988 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 FBXO39Q8N4B4 442 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 SPATA6LQ8N4H0 392 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 RAB42Q8N4Z0 105 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 ASB11Q8WXH4 323 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 RAD51AP1Q96B01 352 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 ITPKCQ96DU7 683 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 TSPAN17Q96FV3 270 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 PPM1MQ96MI6 270 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 PAFAH2Q99487 392 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 GPR22Q99680 433 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 CMKLR1Q99788 373 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 MCMBPQ9BTE3 642 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
LETMD1-234ENST00000552645 KLHL25Q9H0H3 589 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 NPHS2Q9NP85 383 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 PISDQ9UG56 409 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 ADAMTS6Q9UKP5 1117 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 GRID1Q9ULK0 1009 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 LOXL2Q9Y4K0 774 aa9.61□□□□□ -0.87
LETMD1-234ENST00000552645 C2orf74A8MZ97 194 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 E9PBE3 544 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 TM9SF1O15321 606 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 PSIP1O75475 530 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CHRM5P08912 532 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ZNF37AP17032 561 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ITIH1P19827 911 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CD9P21926 228 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CDH3P22223 829 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 PKLRP30613 574 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 GMPRP36959 345 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 KPNA2P52292 529 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 MAPK10P53779 464 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 RAB10P61026 200 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 SHC2P98077 582 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 MN1Q10571 1320 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 UGT2A3Q6UWM9 527 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 TMEM207Q6UWW9 146 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CYHR1Q6ZMK1 362 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 Q6ZNX1 250 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 RIPOR1Q6ZS17 1223 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 DHDDSQ86SQ9 333 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ADGRF3Q8IZF5 1079 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 MARVELD2Q8N4S9 558 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 AGBL5Q8NDL9 886 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 OR9A1PQ8NGU1 263 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 WDR36Q8NI36 951 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 JADE3Q92613 823 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 LIN37Q96GY3 246 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 MAP3K3Q99759 626 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 SYTL2Q9HCH5 934 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 SOHLH2Q9NX45 425 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 SPHK1Q9NYA1 384 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 UTP6Q9NYH9 597 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ACTR10Q9NZ32 417 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 OR6C2Q9NZP2 312 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 IGHV5-51A0A0C4DH38 117 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 A0A1W2PNU3 283 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 FAM221BA6H8Z2 402 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 NPEPPSL1A6NEC2 478 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 EFCAB7A8K855 629 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 EIF3FO00303 357 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 PLD2O14939 933 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CASQ2O14958 399 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 TNFSF15O95150 251 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 TSPAN12O95859 305 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 C9P02748 559 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 C8GP07360 202 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CCL4P13236 92 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 PVRP15151 417 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CYP2A7P20853 494 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 GCAP28676 217 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 PRDX3P30048 256 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ARFIP2P53365 341 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 MTTPP55157 894 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 FOXM1Q08050 763 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CYP4F3Q08477 520 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 ILF2Q12905 390 aaKnown RBP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 CAMK2BQ13554 666 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 TRA2AQ13595 282 aaKnown RBP eCLIP9.6□□□□□ -0.87
LETMD1-234ENST00000552645 GRB7Q14451 532 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 KCNAB1Q14722 419 aa9.6□□□□□ -0.87
LETMD1-234ENST00000552645 MBOAT1Q6ZNC8 495 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms