RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ST3GAL2Q16842 350 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ACCSLQ4AC99 568 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF542PQ5EBM4 170 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SYCP2LQ5T4T6 812 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 NEK5Q6P3R8 708 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SCYL2Q6P3W7 929 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 MZT2AQ6P582 158 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ALKBH5Q6P6C2 394 aaKnown RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 RANBP10Q6VN20 620 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 RAD9BQ6WBX8 426 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 RNF44Q7L0R7 432 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 RABEPKQ7Z6M1 372 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 IQCHQ86VS3 1027 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 NRROSQ86YC3 692 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PSTKQ8IV42 348 aaKnown RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 KRT78Q8N1N4 520 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF548Q8NEK5 533 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 OSR1Q8TAX0 266 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ZNF564Q8TBZ8 553 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 TEKT4Q8WW24 435 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PIH1D2Q8WWB5 315 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ASB12Q8WXK4 309 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PDXPQ96GD0 296 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ZDHHC12Q96GR4 267 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PRR11Q96HE9 360 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 HS6ST2Q96MM7 605 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PSKH2Q96QS6 385 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 OMDQ99983 421 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 UNKQ9C0B0 810 aaKnown RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PDCL3Q9H2J4 239 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 FGF22Q9HCT0 170 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SEPT11Q9NVA2 429 aaKnown RBP4.82□□□□□ -1.64
SCAF11-214ENST00000550893 PARVAQ9NVD7 372 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ELOVL5Q9NYP7 299 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 MYO1AQ9UBC5 1043 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 SLC12A6Q9UHW9 1150 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 ANAPC7Q9UJX3 599 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 CORO2BQ9UQ03 480 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 HYOU1Q9Y4L1 999 aa4.82□□□□□ -1.64
SCAF11-214ENST00000550893 COL6A6A6NMZ7 2263 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3DA0A087WVF3 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3IA0A087WXS9 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3EA0A087X179 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3KA0A087X1G2 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3FA6NER0 549 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3LB9A6J9 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 PRAMEF26H0Y7S4 382 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 CLIC1O00299 241 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 GAPDHSO14556 408 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 BUB1O43683 1085 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 PAK4O96013 591 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SERPINC1P01008 464 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 CSF2P04141 144 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3HP0C7X1 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 GNSP15586 552 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 ACP1P24666 158 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 ADRA1DP25100 572 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 MAN1A1P33908 653 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 HADHBP55084 474 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 IL10RBQ08334 325 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SLC20A2Q08357 652 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 MSLNQ13421 630 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 FHL3Q13643 280 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 DAG1Q14118 895 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 MFSD13AQ14CX5 517 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 UGP2Q16851 508 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 ALG11Q2TAA5 492 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SETMARQ53H47 684 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TDRD12Q587J7 1177 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 PPP6R3Q5H9R7 873 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SPECC1LQ69YQ0 1117 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3GQ6DHY5 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3CQ6IPX1 549 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 KIAA1161Q6NSJ0 714 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 RETSATQ6NUM9 610 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 DCUN1D2Q6PH85 259 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 DHRS13Q6UX07 377 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 LRRC31Q6UY01 552 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 GDPD4Q6W3E5 623 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 Q6ZSR6 202 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 B4GALNT4Q76KP1 1039 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 DPPA4Q7L190 304 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 HSD11B1LQ7Z5J1 315 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TECPR1Q7Z6L1 1165 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SRLQ86TD4 932 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 PRPF39Q86UA1 669 aaKnown RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 C17orf82Q86X59 251 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 LIX1LQ8IVB5 337 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 KLHDC8BQ8IXV7 354 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 SLC35F3Q8IY50 421 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 TBC1D3Q8IZP1 549 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-214ENST00000550893 EID2Q8N6I1 236 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 LRRC57Q8N9N7 239 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 MSANTD4Q8NCY6 345 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 DENND6BQ8NEG7 585 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 OR4C6Q8NH72 309 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 CCL4L1Q8NHW4 92 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 OR1E3Q8WZA6 343 aa4.81□□□□□ -1.64
SCAF11-214ENST00000550893 KRT35Q92764 455 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms