RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, human

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-206	ENST00000550406	DYRK1B	Q9Y463	629 aa		12.51	□□□□□ -0.41
RAB5C-206	ENST00000550406	NEUROG3	Q9Y4Z2	214 aa		12.51	□□□□□ -0.41
RAB5C-206	ENST00000550406	TNPO3	Q9Y5L0	923 aa	Known RBP	12.51	□□□□□ -0.41
RAB5C-206	ENST00000550406	KCNE2	Q9Y6J6	123 aa		12.51	□□□□□ -0.41
RAB5C-206	ENST00000550406	FER1L5	A0AVI2	2057 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	SDK2	Q58EX2	2172 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	LOC105369274	A0A096LPK9	316 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	LOC102723532	A0A0G2JNH3	316 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406		A0A0J9YVX5	310 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406		A0A1B0GTL3	188 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	FEZF1	A0PJY2	475 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	TRABD2B	A6NFA1	517 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	GOLGA6L10	A6NI86	522 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	WFS1	O76024	890 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	MSL3P1	P0C860	447 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	DHRS4L1	P0CG22	281 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	C1GALT1C1L	P0DN25	315 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	CD22	P20273	847 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	HRH2	P25021	359 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	ALDH3A1	P30838	453 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	MLLT3	P42568	568 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	CDH13	P55290	713 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	DNAJB13	P59910	316 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	HERVK_113	P63132	956 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	RELA	Q04206	551 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	EIF3I	Q13347	325 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	GTF2H2	Q13888	395 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	PDK4	Q16654	411 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	ATG9B	Q674R7	924 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	FRMPD2B	Q6IN97	320 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	GTF2H2C	Q6P1K8	395 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	METTL2B	Q6P1Q9	378 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	FOXR1	Q6PIV2	292 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	RNF44	Q7L0R7	432 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	SLC22A9	Q8IVM8	553 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	MCAT	Q8IVS2	390 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	C10orf107	Q8IVU9	208 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	OR4N4	Q8N0Y3	316 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	OR1L3	Q8NH93	324 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	L3HYPDH	Q96EM0	354 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	WDR34	Q96EX3	536 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	ZNF285	Q96NJ3	590 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	OR2A5	Q96R48	311 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	OR6C1	Q96RD1	312 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	CTRC	Q99895	268 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	MECR	Q9BV79	373 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	ERVK-6	Q9BXR3	956 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	SPRTN	Q9H040	489 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	STMN4	Q9H169	189 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	POLR1B	Q9H9Y6	1135 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	PELI2	Q9HAT8	420 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	KCNK9	Q9NPC2	374 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	SOHLH2	Q9NX45	425 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	PISD	Q9UG56	409 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	MSRB2	Q9Y3D2	182 aa		12.5	□□□□□ -0.41
RAB5C-206	ENST00000550406	SCN3A	Q9NY46	2000 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	C9orf172	C9J069	976 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	BPGM	P07738	259 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	FGF5	P12034	268 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	EPB42	P16452	691 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	TSPAN8	P19075	237 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	GNAZ	P19086	355 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	BCL6	P41182	706 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	CASP2	P42575	452 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	CCR10	P46092	362 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	ARL4D	P49703	201 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	CCR8	P51685	355 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	MAPK10	P53779	464 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	WDR4	P57081	412 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	GABRE	P78334	506 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	REEP5	Q00765	189 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	CHIT1	Q13231	466 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	DOC2A	Q14183	400 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	RTP5	Q14D33	572 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	TMTC4	Q5T4D3	741 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	PRAMEF17	Q5VTA0	474 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	CES4A	Q5XG92	561 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	ATG14	Q6ZNE5	492 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	VN1R4	Q7Z5H5	301 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	ADCK2	Q7Z695	626 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	TMPRSS11B	Q86T26	416 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	CCDC63	Q8NA47	563 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	OR52B6	Q8NGF0	335 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	OR6Y1	Q8NGX8	325 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	USP7	Q93009	1102 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	RNF31	Q96EP0	1072 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	SLC46A1	Q96NT5	459 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	SARG	Q9BW04	601 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	GATA5	Q9BWX5	397 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	CAPS2	Q9BXY5	557 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	NRSN2	Q9GZP1	204 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	IQCG	Q9H095	443 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	GSTO2	Q9H4Y5	243 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	NOL11	Q9H8H0	719 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	IPPK	Q9H8X2	491 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	FGF21	Q9NSA1	209 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	GEMIN8	Q9NWZ8	242 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	SLC39A1	Q9NY26	324 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	ZNF225	Q9UK10	706 aa		12.49	□□□□□ -0.41
RAB5C-206	ENST00000550406	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.49	□□□□□ -0.41

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