RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 SLCO2A1Q92959 643 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 OR2A5Q96R48 311 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 MESP1Q9BRJ9 268 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 YIPF2Q9BWQ6 316 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 CUEDC1Q9NWM3 386 aaPredicted RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 SLC17A6Q9P2U8 582 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 B3GNT3Q9Y2A9 372 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 ESPL1Q14674 2120 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 H7BY64 318 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 EIF3FO00303 357 aaPredicted RBP15.55■□□□□ 0.08
VPS29-207ENST00000549970 P2RX6O15547 441 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 GABRB3P28472 473 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 CARSP49589 748 aaKnown RBP15.55■□□□□ 0.08
VPS29-207ENST00000549970 RGS4P49798 205 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 EMP3P54852 163 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 TBPL1P62380 186 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 TIAL1Q01085 375 aaKnown RBP eCLIP15.55■□□□□ 0.08
VPS29-207ENST00000549970 RBM20Q5T481 1227 aaKnown RBP15.55■□□□□ 0.08
VPS29-207ENST00000549970 IRAK1BP1Q5VVH5 260 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 LRRC8EQ6NSJ5 796 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 IGFL3Q6UXB1 125 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 ZADH2Q8N4Q0 377 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 OR11G2Q8NGC1 345 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 EEF1AKMT1Q8WVE0 214 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 MMABQ96EY8 250 aaPredicted RBP15.55■□□□□ 0.08
VPS29-207ENST00000549970 CERS2Q96G23 380 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 CFAP36Q96G28 342 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 VPS50Q96JG6 964 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 PWWP2AQ96N64 755 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 PRAP1Q96NZ9 151 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 NAT9Q9BTE0 207 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 ILKAPQ9H0C8 392 aaPredicted RBP15.55■□□□□ 0.08
VPS29-207ENST00000549970 PPANQ9NQ55 473 aaKnown RBP15.55■□□□□ 0.08
VPS29-207ENST00000549970 CCDC177Q9NQR7 707 aaPredicted RBP15.55■□□□□ 0.08
VPS29-207ENST00000549970 TAS2R13Q9NYV9 303 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 TRPC4Q9UBN4 977 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 C3orf18Q9UK00 162 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 ADAMTS6Q9UKP5 1117 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 CDC14AQ9UNH5 594 aa15.55■□□□□ 0.08
VPS29-207ENST00000549970 AHSGP02765 367 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 STATHP02808 62 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 ACPPP15309 386 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 IVDP26440 423 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 CDKN2DP55273 166 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 GNG11P61952 73 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 DSG2Q14126 1118 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 PAQR3Q6TCH7 311 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 MBOAT1Q6ZNC8 495 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 LAPTM4BQ86VI4 370 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 CNTN4Q8IWV2 1026 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 PALM2Q8IXS6 379 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 IQCKQ8N0W5 287 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 MYO1HQ8N1T3 1032 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 MCOLN3Q8TDD5 553 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 ALKBH8Q96BT7 664 aaKnown RBP15.54■□□□□ 0.08
VPS29-207ENST00000549970 C8orf44Q96CB5 159 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 C19orf60Q96EN9 201 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 MVB12AQ96EY5 273 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 LINGO1Q96FE5 620 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 SLC29A3Q9BZD2 475 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 CHMP2BQ9UQN3 213 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 PDE10AQ9Y233 779 aa15.54■□□□□ 0.08
VPS29-207ENST00000549970 CNTRLQ7Z7A1 2325 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 IGLV3-12A0A075B6K2 115 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 A0A0A6YYC8 382 aaPredicted RBP15.53■□□□□ 0.08
VPS29-207ENST00000549970 TCP11X1B4DZS4 312 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 I3L1I5 382 aaPredicted RBP15.53■□□□□ 0.08
VPS29-207ENST00000549970 TXNDC9O14530 226 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 MAP2K7O14733 419 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 PRPF4O43172 522 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS29-207ENST00000549970 C8GP07360 202 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 ANXA5P08758 320 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 VARSP26640 1264 aaKnown RBP15.53■□□□□ 0.08
VPS29-207ENST00000549970 ELK3P41970 407 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 DR1Q01658 176 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 MRPL49Q13405 166 aaKnown RBP15.53■□□□□ 0.08
VPS29-207ENST00000549970 MORF4L2Q15014 288 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 HIF1AQ16665 826 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 FHL5Q5TD97 284 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 AGAP7PQ5VUJ5 663 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 GARNL3Q5VVW2 1013 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 KIAA0408Q6ZU52 694 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 CREG2Q8IUH2 290 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 PDIK1LQ8N165 341 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 CISD2Q8N5K1 135 aaKnown RBP15.53■□□□□ 0.08
VPS29-207ENST00000549970 SNRNP40Q96DI7 357 aaKnown RBP15.53■□□□□ 0.08
VPS29-207ENST00000549970 THOC3Q96J01 351 aaKnown RBP15.53■□□□□ 0.08
VPS29-207ENST00000549970 CCDC138Q96M89 665 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 AGAP4Q96P64 663 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 TRIM51Q9BSJ1 452 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 LHPPQ9H008 270 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 DRC3Q9H069 523 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 ATG10Q9H0Y0 220 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 ZNF160Q9HCG1 818 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 CSAG2Q9Y5P2 127 aa15.53■□□□□ 0.08
VPS29-207ENST00000549970 USP9XQ93008 2570 aaPredicted RBP15.52■□□□□ 0.08
VPS29-207ENST00000549970 BLACEA4D250 179 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 IDSB3KWA1 339 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 FOXS1O43638 330 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 AGFG2O95081 481 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms