RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ALPK1Q96QP1 1244 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ZBTB18Q99592 522 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 C6orf62Q9GZU0 229 aaPredicted RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 KIF17Q9P2E2 1029 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 MAGEL2Q9UJ55 1249 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 DLGAP4Q9Y2H0 992 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 VPS13AQ96RL7 3174 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CXCR6O00574 342 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF197O14709 1029 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 KPNA5O15131 536 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CYP7B1O75881 506 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CDKN2CP42773 168 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 PTPN5P54829 565 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ERVK-21P61565 698 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 BCL2L1Q07817 233 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CATSPEREQ5SY80 951 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 TTC23Q5W5X9 447 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 LAIR2Q6ISS4 152 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CES5AQ6NT32 575 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 PROSER1Q86XN7 944 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 MICU2Q8IYU8 434 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CBARPQ8N350 705 aaPredicted RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CD200R1Q8TD46 325 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 OTUB1Q96FW1 271 aaPredicted RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 DERL2Q9GZP9 239 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 P2RY12Q9H244 342 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ATP13A3Q9H7F0 1226 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SPHK2Q9NRA0 654 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 VNN3Q9NY84 501 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SH3BP4Q9P0V3 963 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 OPTCQ9UBM4 332 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 RAPGEFL1Q9UHV5 662 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 DNMT3AQ9Y6K1 912 aaPredicted RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 WASH3PC4AMC7 463 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 GAPDHSO14556 408 aaPredicted RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 BCKDKO14874 412 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SH3BP5O60239 455 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CPNE6O95741 557 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 UMPSP11172 480 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 DBTP11182 482 aaKnown RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 HOXD12P35452 270 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 HNF4AP41235 474 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 MEF2AQ02078 507 aaPredicted RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CACNG1Q06432 222 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 NPTX1Q15818 432 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 INAVAQ3KP66 663 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 NIPAL1Q6NVV3 410 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SERPINA13PQ6UXR4 307 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 RGL4Q8IZJ4 473 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 NLGN4XQ8N0W4 816 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF540Q8NDQ6 660 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SLC13A3Q8WWT9 602 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SORCS1Q8WY21 1168 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 NRTNQ99748 197 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 RNF167Q9H6Y7 350 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 CTPS2Q9NRF8 586 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 GPRC5BQ9NZH0 403 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 RHCGQ9UBD6 479 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 GNPTGQ9UJJ9 305 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 NUP210Q8TEM1 1887 aaPredicted RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 TRBV5-4A0A0C4DH59 114 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 PABPN1LA6NDY0 278 aaKnown RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 KPNA4O00629 521 aaPredicted RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 PRMT5O14744 637 aaPredicted RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 VIPP01282 170 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 LCKP06239 509 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 PTGER3P43115 390 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 CTSOP43234 321 aaPredicted RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SNRPD1P62314 119 aaKnown RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SLC14A1Q13336 389 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 CHRNA6Q15825 494 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 CERS6Q6ZMG9 384 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 ADIPOR2Q86V24 386 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 ZSWIM3Q96MP5 696 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SLC25A37Q9NYZ2 338 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SLC22A14Q9Y267 594 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SPTBP11277 2137 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 ELOVL7A1L3X0 281 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 PER2O15055 1255 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 PFDN6O15212 129 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 COQ9O75208 318 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 MYO1DO94832 1006 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 DNTTP04053 509 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 NUDT7P0C024 238 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 BMP4P12644 408 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 GGT1P19440 569 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 DCTP40126 519 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 C22orf39Q6P5X5 142 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SUSD1Q6UWL2 747 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 CLECL1Q8IZS7 167 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 EID3Q8N140 333 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 LILRA3Q8N6C8 439 aaPredicted RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 ARL10Q8N8L6 244 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 OR5AK3PQ8NH89 298 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SPPL2AQ8TCT8 520 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 FKBP10Q96AY3 582 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 MCCC1Q96RQ3 725 aaPredicted RBP10.75□□□□□ -0.69
LINC00661-204ENST00000549354 ELOVL6Q9H5J4 265 aa10.75□□□□□ -0.69
LINC00661-204ENST00000549354 SIAEQ9HAT2 523 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms