RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ECSITQ9BQ95 431 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 TMEM168Q9H0V1 697 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 RPF2Q9H7B2 306 aaKnown RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 OBP2AQ9NY56 170 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 VPS29Q9UBQ0 182 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 AP4S1Q9Y587 144 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 PCDHA9Q9Y5H5 950 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 NINQ8N4C6 2090 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 KLK1P06870 262 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 AMD1P17707 334 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 ADSLP30566 484 aaPredicted RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 AP1S2P56377 157 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 GRSF1Q12849 480 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 LAPTM4AQ15012 233 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 ZNF658BQ4V348 819 aaPredicted RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 SAMD4BQ5PRF9 694 aaKnown RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 ANKRD34AQ69YU3 496 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 MSRB3Q8IXL7 192 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 AMER3Q8N944 861 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 TP53I13Q8NBR0 393 aaPredicted RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 MAGEC3Q8TD91 643 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 GTF2H4Q92759 462 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 MAL2Q969L2 176 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 ZCCHC2Q9C0B9 1178 aaKnown RBP11.54□□□□□ -0.56
CCDC38-202ENST00000546386 LTB4R2Q9NPC1 389 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 EBF1Q9UH73 591 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 TRPS1Q9UHF7 1281 aa11.54□□□□□ -0.56
CCDC38-202ENST00000546386 A0A1B0GTW7 788 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 PSMD11O00231 422 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 VPS4BO75351 444 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 RASGRP1O95267 797 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ANXA4P09525 319 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SLC35G4P0C7Q5 338 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 JUPP14923 745 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 PLA2G16P53816 162 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 CLNS1AP54105 237 aaKnown RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 PNLIPRP1P54315 467 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 DPTQ07507 201 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ACSM2AQ08AH3 577 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ACSM2BQ68CK6 577 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 CAPN13Q6MZZ7 669 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SLCO4C1Q6ZQN7 724 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 OR4E2Q8NGC2 313 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 EME1Q96AY2 570 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 OTUB1Q96FW1 271 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 COX14Q96I36 57 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 RNF145Q96MT1 663 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 F2RL3Q96RI0 385 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 CGREF1Q99674 301 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 REXO4Q9GZR2 422 aaKnown RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 C6orf106Q9H6K1 298 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 TBC1D29Q9UFV1 150 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 LEF1Q9UJU2 399 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ACSL6Q9UKU0 697 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 NEUROG3Q9Y4Z2 214 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 LRRC42Q9Y546 428 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 U3KQV3 271 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 CFAP47Q6ZTR5 3102 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SEC16AO15027 2179 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 LOC400499M0QZD8 3231 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SHISA7A6NL88 538 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SLC28A1O00337 649 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SLC22A2O15244 555 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 FKBP6O75344 327 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 DIRAS1O95057 198 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 POU2F2P09086 479 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 NUDT7P0C024 238 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ALPPL2P10696 532 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 COX7A2P14406 83 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ALDH9A1P49189 494 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 RPS21P63220 83 aaKnown RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 CDKL1Q00532 357 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 PDCD4Q53EL6 469 aaKnown RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 TBCELQ5QJ74 424 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 HMBOX1Q6NT76 420 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 C8orf82Q6P1X6 216 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ARMCX6Q7L4S7 300 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 ZNF551Q7Z340 670 aaPredicted RBP11.53□□□□□ -0.56
CCDC38-202ENST00000546386 HMGN2P46Q86SG4 172 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 HID1Q8IV36 788 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 HS3ST5Q8IZT8 346 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 DTWD1Q8N5C7 304 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 WDR20Q8TBZ3 569 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 UBTD2Q8WUN7 234 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 NCLNQ969V3 563 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 MS4A3Q96HJ5 214 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 FOXQ1Q9C009 403 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SYNPO2LQ9H987 977 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 GID8Q9NWU2 228 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 SPHK1Q9NYA1 384 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 EPS15L1Q9UBC2 864 aa11.53□□□□□ -0.56
CCDC38-202ENST00000546386 PIPSLA2A3N6 862 aa11.52□□□□□ -0.56
CCDC38-202ENST00000546386 EEDO75530 441 aaKnown RBP11.52□□□□□ -0.56
CCDC38-202ENST00000546386 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.56
CCDC38-202ENST00000546386 PIM1P11309 404 aaPredicted RBP11.52□□□□□ -0.56
CCDC38-202ENST00000546386 HRH2P25021 359 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms