RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 LMF1Q96S06 567 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 SLC30A3Q99726 388 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 HIST1H2AJQ99878 128 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 WDR77Q9BQA1 342 aaPredicted RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 H2AFJQ9BTM1 129 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 TRIM54Q9BYV2 358 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 LHPPQ9H008 270 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 MKKSQ9NPJ1 570 aaPredicted RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 CCDC177Q9NQR7 707 aaPredicted RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 AGPAT4Q9NRZ5 378 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 ABCF3Q9NUQ8 709 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 TRMT1Q9NXH9 659 aaKnown RBP8.92□□□□□ -0.98
YBX3-218ENST00000546298 TRPC4Q9UBN4 977 aa8.92□□□□□ -0.98
YBX3-218ENST00000546298 MYO18BQ8IUG5 2567 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 NSG1A0A0A6YYJ2 146 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 IGKV1-8A0A0C4DH67 115 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 TCP11X1B4DZS4 312 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 H7BY64 318 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 NRP2O60462 931 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 CCND1P24385 295 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 IMPA1P29218 277 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 GRK3P35626 688 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 AVPR1BP47901 424 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 UQCRFS1P47985 274 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 GLRBP48167 497 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 RPS15AP62244 130 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 AP2B1P63010 937 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 DHX9Q08211 1270 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 ELOAQ14241 798 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 MORF4L2Q15014 288 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 TLR1Q15399 786 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 BBS9Q3SYG4 887 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 ATG9BQ674R7 924 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 ISLR2Q6UXK2 745 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 NDUFAF7Q7L592 441 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 PIWIL4Q7Z3Z4 852 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 GALNT7Q86SF2 657 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 KBTBD2Q8IY47 623 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 LRRC56Q8IYG6 542 aaPredicted RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 PRSS58Q8IYP2 241 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 AGGF1Q8N302 714 aaeCLIP8.91□□□□□ -0.98
YBX3-218ENST00000546298 CISD2Q8N5K1 135 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 PPFIBP2Q8ND30 876 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 DNAJB14Q8TBM8 379 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 LRRC39Q96DD0 335 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 SNRNP40Q96DI7 357 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 THOC3Q96J01 351 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 PRAP1Q96NZ9 151 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 FAM129AQ9BZQ8 928 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 DRC3Q9H069 523 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 DDX47Q9H0S4 455 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 PARVBQ9HBI1 364 aa8.91□□□□□ -0.98
YBX3-218ENST00000546298 CUEDC1Q9NWM3 386 aaPredicted RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 STOX2Q9P2F5 926 aaPredicted RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 RUVBL1Q9Y265 456 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 COPG1Q9Y678 874 aaKnown RBP8.91□□□□□ -0.98
YBX3-218ENST00000546298 KCNE1BA0A087WTH5 132 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 A0A0A6YYC8 382 aaPredicted RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 BLACEA4D250 179 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 IDSB3KWA1 339 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 H0YIG0 161 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 I3L1I5 382 aaPredicted RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 MASP2O00187 686 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 NDC80O14777 642 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 HAT1O14929 419 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 MED26O95402 600 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 DDAH2O95865 285 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 SERPINA7P05543 415 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 HEXBP07686 556 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 CYC1P08574 325 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 F7P08709 466 aaPredicted RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 ICAM2P13598 275 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 SLC26A3P40879 764 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 PAFAH1B1P43034 410 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 TSFMP43897 325 aaKnown RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 ARL4CP56559 192 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 IL2P60568 153 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 PDAP1Q13442 181 aaKnown RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 HKDC1Q2TB90 917 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 PRR30Q53SZ7 412 aaPredicted RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 VWA2Q5GFL6 755 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 B3GNTL1Q67FW5 361 aaPredicted RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 CAPN13Q6MZZ7 669 aaPredicted RBP8.9□□□□□ -0.98
YBX3-218ENST00000546298 AGTRAPQ6RW13 159 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 IGFL2Q6UWQ7 119 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 C17orf64Q86WR6 236 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 TMEM151BQ8IW70 566 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 CNTN4Q8IWV2 1026 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 DTWD1Q8N5C7 304 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 TBC1D19Q8N5T2 526 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 CAMKVQ8NCB2 501 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 SSC4DQ8WTU2 575 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 EEF1AKMT1Q8WVE0 214 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 METTL21AQ8WXB1 218 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 ATL1Q8WXF7 558 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 CERS2Q96G23 380 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 PSMG3-AS1Q96PY0 264 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 NDNQ99608 321 aa8.9□□□□□ -0.98
YBX3-218ENST00000546298 HAUS8Q9BT25 410 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms