RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 FAM120CQ9NX05 1096 aaKnown RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 KCTD5Q9NXV2 234 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 WWOXQ9NZC7 414 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 VAPAQ9P0L0 249 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 IL17CQ9P0M4 197 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SLAMF8Q9P0V8 285 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 GIMAP2Q9UG22 337 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 RAPGEFL1Q9UHV5 662 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 TMEFF2Q9UIK5 374 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-225ENST00000545920 OSGIN1Q9UJX0 560 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 STOML2Q9UJZ1 356 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 MKLN1Q9UL63 735 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 SPO11Q9Y5K1 396 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 GMPPBQ9Y5P6 360 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 PEX16Q9Y5Y5 336 aa6.29□□□□□ -1.4
SNHG1-225ENST00000545920 OR2A25A4D2G3 310 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SH3D21A4FU49 640 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 TRIM43BA6NCK2 446 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PABPN1LA6NDY0 278 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ARRDC5A6NEK1 342 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 H3BNC9 293 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 J3QRK9 145 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 GFRA2O00451 464 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SOX1O00570 391 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CCL22O00626 93 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ADAMDEC1O15204 470 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 TLR5O60602 858 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 NIPSNAP2O75323 286 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SEC22BO75396 215 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 STK16O75716 305 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 UPK1BO75841 260 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SEC24AO95486 1093 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SERPINA1P01009 418 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 POMCP01189 267 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 APOA1P02647 267 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 C9P02748 559 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 FABP3P05413 133 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 RHOCP08134 193 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 HMBSP08397 361 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ANXA5P08758 320 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 MPC1LP0DKB6 136 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ARAFP10398 606 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ANXA8P13928 327 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SELPP16109 830 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 IL7RP16871 459 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 GPX2P18283 190 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 RPL10P27635 214 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CST5P28325 142 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 S100A5P33763 92 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 HOXD12P35452 270 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ACVRL1P37023 503 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 EIF2DP41214 584 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ASMTP46597 345 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 MAP2K3P46734 347 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 YAP1P46937 504 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 TUFMP49411 452 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PRIM2P49643 509 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 EIF2B2P49770 351 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 RABGGTBP53611 331 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 AP1S2P56377 157 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SNRPNP63162 240 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 RPL38P63173 70 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 AQP6Q13520 282 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 MAD2L1BPQ15013 274 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ABRAXAS2Q15018 415 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CYP2A13Q16696 494 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 DUOXA1Q1HG43 343 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CTU2Q2VPK5 515 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ZNF404Q494X3 552 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 RFTN2Q52LD8 501 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ANXA8L1Q5VT79 327 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PNCKQ6P2M8 343 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 NCEH1Q6PIU2 408 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ENPP6Q6UWR7 440 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 GDPGP1Q6ZNW5 385 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 MOB2Q70IA6 237 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SLC24A5Q71RS6 500 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CBLL1Q75N03 491 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 B3GNT8Q7Z7M8 397 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 HORMAD1Q86X24 394 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 MSRB3Q8IXL7 192 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 PIANPQ8IYJ0 282 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CPNE9Q8IYJ1 553 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 LIX1Q8N485 282 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ZBTB2Q8N680 514 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 C1orf52Q8N6N3 182 aaKnown RBP6.28□□□□□ -1.4
SNHG1-225ENST00000545920 DENND6BQ8NEG7 585 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 VPS37AQ8NEZ2 397 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 FLCNQ8NFG4 579 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 MDGA1Q8NFP4 955 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 OR52B6Q8NGF0 335 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 LPPQ93052 612 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 SLC35B4Q969S0 331 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 FBXL8Q96CD0 374 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 LGALS12Q96DT0 336 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ZHX1-C8orf76Q96EF9 292 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 CTRCQ99895 268 aa6.28□□□□□ -1.4
SNHG1-225ENST00000545920 ADAM2Q99965 735 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms