RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 CD2P06729 351 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 WASP42768 502 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 PPP2R2BQ00005 443 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 OTOP2Q7RTS6 562 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 EFHD2Q96C19 240 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 OTUB2Q96DC9 234 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 SNTG1Q9NSN8 517 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 MRPS17Q9Y2R5 130 aaKnown RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 SLC11A1P49279 550 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 PLD6Q8N2A8 252 aaKnown RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 CNDP2Q96KP4 475 aaKnown RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 KCNC2Q96PR1 638 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 DCSTAMPQ9H295 470 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 TPT1P8Q9HAU6 139 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 TMEM45AQ9NWC5 275 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 ANXA2P2A6NMY6 339 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 TRIM3O75382 744 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 EEDO75530 441 aaKnown RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 ANXA2P07355 339 aaKnown RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 PFKMP08237 780 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 GANABQ14697 944 aaKnown RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 MAMDC4Q6UXC1 1216 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 GPALPP1Q8IXQ4 340 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF527Q8NB42 609 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF461Q8TAF7 563 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 GPR151Q8TDV0 419 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 MRGPRX2Q96LB1 330 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 TEPSINQ96N21 525 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 TCF7L1Q9HCS4 588 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 HCN1O60741 890 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 ENTPD6O75354 484 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 CBX3Q13185 183 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 MGAT4BQ9UQ53 548 aa12.18□□□□□ -0.46
COL4A6-209ENST00000545689 SPIN1Q9Y657 262 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-209ENST00000545689 TTC24A2A3L6 582 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 RHPN2P1A8MT19 583 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ITGA10O75578 1167 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 SNAPC5O75971 98 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 RASAL1O95294 804 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 SOD2P04179 222 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ARCN1P48444 511 aaKnown RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 TMBIM6P55061 237 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 AGTRAPQ6RW13 159 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 MARVELD2Q8N4S9 558 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 SLC39A3Q9BRY0 314 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 BCL2L14Q9BZR8 327 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ELAC1Q9H777 363 aaKnown RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 EXO5Q9H790 373 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 CCM2LQ9NUG4 571 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 MKLN1Q9UL63 735 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 KCTD3Q9Y597 815 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 INSL5Q9Y5Q6 135 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 HCRTO43612 131 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 UBAP2Q5T6F2 1119 aaKnown RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 SRRDQ9UH36 339 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 KMOO15229 486 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 SNNO75324 88 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 TGFB1P01137 390 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 KLK1P06870 262 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 GALNT1Q10472 559 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ST3GAL3Q11203 375 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 PTCHD3Q3KNS1 767 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 NUP54Q7Z3B4 507 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ZFAND4Q86XD8 727 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 DCUN1D3Q8IWE4 304 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 PYCR2Q96C36 320 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 TRNT1Q96Q11 434 aaKnown RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 GPER1Q99527 375 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 FANCGO15287 622 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 TLX3O43711 291 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 CNTN5O94779 1100 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 S100A9P06702 114 aaKnown RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 GSTM4Q03013 218 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 MXD1Q05195 221 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 QSOX2Q6ZRP7 698 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 MINDY1Q8N5J2 469 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 NFKBIDQ8NI38 313 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 TMEM174Q8WUU8 243 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ACOT12Q8WYK0 555 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ART5Q96L15 291 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 GSDMCQ9BYG8 508 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 LYARQ9NX58 379 aaKnown RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 RNF11Q9Y3C5 154 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 INSL6Q9Y581 213 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 A0A0X1KG70 313 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF623O75123 536 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 SNX4O95219 450 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 EFNA1P20827 205 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-209ENST00000545689 BDKRB1P46663 353 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 ARHGDIBP52566 201 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 SLC13A2Q13183 592 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 MPP2Q14168 576 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 OLFML2AQ68BL7 652 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 OR9A1PQ8NGU1 263 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 LRIG1Q96JA1 1093 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms