RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TMEM178AQ8NBL3 297 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 OR2A1Q8NGT9 310 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 FAM57AQ8TBR7 257 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ASB5Q8WWX0 329 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 MVB12AQ96EY5 273 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 MMABQ96EY8 250 aaPredicted RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 TBL1YQ9BQ87 522 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 VN1R1Q9GZP7 353 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 ARNT2Q9HBZ2 717 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 KCNJ16Q9NPI9 418 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 DDX56Q9NY93 547 aaKnown RBP8.87□□□□□ -0.99
CHD4-212ENST00000545083 CHMP5Q9NZZ3 219 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 GNPTGQ9UJJ9 305 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 SLC39A10Q9ULF5 831 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 CDC14AQ9UNH5 594 aa8.87□□□□□ -0.99
CHD4-212ENST00000545083 A0A1B0GTH9 108 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 GABRR3A8MPY1 467 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 IQCF5A8MTL0 148 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 QSOX1O00391 747 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 PRPF4O43172 522 aaKnown RBP eCLIP8.86□□□□□ -0.99
CHD4-212ENST00000545083 PROM1O43490 865 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 CTAG2O75638 210 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 TPOP07202 933 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 OR56A5P0C7T3 313 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 TMEM253P0C7T8 217 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 PTGS2P35354 604 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 BDKRB1P46663 353 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 NR0B1P51843 470 aaKnown RBP8.86□□□□□ -0.99
CHD4-212ENST00000545083 EMP3P54852 163 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 DLX5P56178 289 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 OC90Q02509 493 aaPredicted RBP8.86□□□□□ -0.99
CHD4-212ENST00000545083 MEP1AQ16819 746 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 ODF2Q5BJF6 829 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 ANKRD20A2Q5SQ80 823 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 ANKRD20A1Q5TYW2 823 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 ANKRD20A3Q5VUR7 823 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 TMEM198Q66K66 360 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 LRRC8BQ6P9F7 803 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 TAOK1Q7L7X3 1001 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 BIVMQ86UB2 503 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 ZNF227Q86WZ6 799 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 CCDC50Q8IVM0 306 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 EID3Q8N140 333 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 CSNK1A1LQ8N752 337 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 CYTH2Q99418 400 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 ZFYVE21Q9BQ24 234 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 DPH7Q9BTV6 452 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
CHD4-212ENST00000545083 KCNK13Q9HB14 408 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 LRFN1Q9P244 771 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 CAPN11Q9UMQ6 739 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 RUVBL2Q9Y230 463 aaKnown RBP8.86□□□□□ -0.99
CHD4-212ENST00000545083 AAR2Q9Y312 384 aaKnown RBP8.86□□□□□ -0.99
CHD4-212ENST00000545083 NFS1Q9Y697 457 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 TLN2Q9Y4G6 2542 aa8.86□□□□□ -0.99
CHD4-212ENST00000545083 RTTNQ86VV8 2226 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 FBN1P35555 2871 aaKnown RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 NBEAL1Q6ZS30 2694 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 IGKV1-8A0A0C4DH67 115 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 CCDC162PA2VCL2 907 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 H7C0C1 242 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 P2RX6O15547 441 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 KLK8O60259 260 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 NME2P1O60361 137 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 RPN2P04844 631 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 GYPCP04921 128 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 ANXA5P08758 320 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 COMTP21964 271 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 NME2P22392 152 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 PSMA3P25788 255 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 MSNP26038 577 aaKnown RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 RFC3P40938 356 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 ATP5OP48047 213 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 MARCKSL1P49006 195 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 POU6F1Q14863 301 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 SLC18A3Q16572 532 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 MAPKAPK3Q16644 382 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 ASTE1Q2TB18 679 aaPredicted RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 EMC4Q5J8M3 183 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 UNC5DQ6UXZ4 953 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 ANKRD37Q7Z713 158 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 KLHDC8BQ8IXV7 354 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 FAM98AQ8NCA5 519 aaKnown RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 WFDC11Q8NEX6 87 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 METTL21AQ8WXB1 218 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 ARSGQ96EG1 525 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 SEC16BQ96JE7 1060 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 ALPK1Q96QP1 1244 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 OLFM1Q99784 485 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 GPATCH1Q9BRR8 931 aaKnown RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 ACAT2Q9BWD1 397 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 POLDIP3Q9BY77 421 aaKnown RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 DRC3Q9H069 523 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 GOLPH3Q9H4A6 298 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 PIH1D1Q9NWS0 290 aaKnown RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 R3HDM2Q9Y2K5 976 aaKnown RBP8.85□□□□□ -0.99
CHD4-212ENST00000545083 L3MBTL1Q9Y468 752 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 DNAJC13O75165 2243 aa8.85□□□□□ -0.99
CHD4-212ENST00000545083 FAM237BA0A1B0GVD1 139 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 MROH6A6NGR9 719 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms