RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 FCGR1BQ92637 280 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 TEFMQ96QE5 360 aaKnown RBP5.63□□□□□ -1.51
VPS50-220ENST00000544910 FNDC11Q9BVV2 318 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS50-220ENST00000544910 SNX7Q9UNH6 387 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 TESMINQ9Y4I5 508 aa5.63□□□□□ -1.51
VPS50-220ENST00000544910 ABHD14A-ACY1A0A1B0GW23 586 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TRIM64CA6NLI5 447 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 UBFD1O14562 309 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 GNB5O14775 395 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 MTX2O75431 263 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 EFNA1P20827 205 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 CTSKP43235 329 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CDH12P55289 794 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 DSC1Q08554 894 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 PTCHD3Q3KNS1 767 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 GPRC6AQ5T6X5 926 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 LETMD1Q6P1Q0 360 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 RASSF6Q6ZTQ3 369 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 Q6ZVU0 165 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TMEM102Q8N9M5 508 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 TRIT1Q9H3H1 467 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 LIN28AQ9H9Z2 209 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 TMEM9Q9P0T7 183 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 RBMX2Q9Y388 322 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 GPSM3Q9Y4H4 160 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 A0A1W2PQ72 361 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 MUSKO15146 869 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SLC22A1O15245 554 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TLL1O43897 1013 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CLIC3O95833 236 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 BPIP17213 487 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 OXTRP30559 389 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 STARP49675 285 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TMBIM6P55061 237 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SCN1BQ07699 218 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 RCAN2Q14206 197 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 PTGR1Q14914 329 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CES5AQ6NT32 575 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ENPP6Q6UWR7 440 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 MACC1Q6ZN28 852 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TAS1R1Q7RTX1 841 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CACUL1Q86Y37 369 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 OR52J3Q8NH60 311 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CYB5D2Q8WUJ1 264 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 PIH1D2Q8WWB5 315 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 HTRA1Q92743 480 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SLC35A5Q9BS91 424 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 PDCD10Q9BUL8 212 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 BOCQ9BWV1 1114 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ARMC7Q9H6L4 198 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SMURF2Q9HAU4 748 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 C12orf4Q9NQ89 552 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ZNF224Q9NZL3 707 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 COMMD9Q9P000 198 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 DOLKQ9UPQ8 538 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ERGIC3Q9Y282 383 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 GSAPA4D1B5 854 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 WNT9AO14904 365 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SNAPC5O75971 98 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 KLHL18O94889 574 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 NFATC1O95644 943 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 C9P02748 559 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 IFNW1P05000 195 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CHRM1P11229 460 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 ACADMP11310 421 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ATF4P18848 351 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 PSMD4P55036 377 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 RPS7P62081 194 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 PHC1P78364 1004 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 NPTX1Q15818 432 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 NDUFAF6Q330K2 333 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 USP43Q70EL4 1123 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 CPA6Q8N4T0 437 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 C2orf73Q8N5S3 287 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 C1orf52Q8N6N3 182 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 KLHDC9Q8NEP7 349 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 FAR1Q8WVX9 515 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ITPKCQ96DU7 683 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SMG9Q9H0W8 520 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 OR2AG1Q9H205 316 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 RERGLQ9H628 205 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SEMA3GQ9NS98 782 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 RPS6KB2Q9UBS0 482 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SLC9A8Q9Y2E8 581 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 EVPLQ92817 2033 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 FADS2P1A8MWK0 482 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 K7ERQ8 282 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 ACOT8O14734 319 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 MTRF1O75570 445 aaKnown RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 CLTBP09497 229 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 FPR1P21462 350 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 NR4A1P22736 598 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 TPTEP56180 551 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 SLBPQ14493 270 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS50-220ENST00000544910 MED22Q15528 200 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 PLEKHG6Q3KR16 790 aa5.62□□□□□ -1.51
VPS50-220ENST00000544910 HSF5Q4G112 596 aaPredicted RBP5.62□□□□□ -1.51
VPS50-220ENST00000544910 LIN54Q6MZP7 749 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms