RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 BRINP2Q9C0B6 783 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 TWSG1Q9GZX9 223 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 MUC3AQ02505 3323 aa29.29■■■□□ 2.28
CCM2-219ENST00000544363 TNRC6BQ9UPQ9 1833 aaKnown RBP29.28■■■□□ 2.28
CCM2-219ENST00000544363 LMO7DNF2Z398 122 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 H7BY64 318 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 BTN3A3O00478 584 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 PIAS2O75928 621 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 CCNDBP1O95273 360 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 ACADVLP49748 655 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 ACTN3Q08043 901 aaPredicted RBP29.28■■■□□ 2.28
CCM2-219ENST00000544363 GRIK2Q13002 908 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 ADNP2Q6IQ32 1131 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 TMIGD1Q6UXZ0 262 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 ASRGL1Q7L266 308 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 ZNF740Q8NDX6 193 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 KLHL29Q96CT2 875 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 CMTM7Q96FZ5 175 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 ZC3H10Q96K80 434 aaKnown RBP29.28■■■□□ 2.28
CCM2-219ENST00000544363 PRAP1Q96NZ9 151 aa29.28■■■□□ 2.28
CCM2-219ENST00000544363 MRPS30Q9NP92 439 aaKnown RBP29.28■■■□□ 2.28
CCM2-219ENST00000544363 NOP53Q9NZM5 478 aaKnown RBP29.28■■■□□ 2.28
CCM2-219ENST00000544363 MAGEB17A8MXT2 336 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 ISM1B1AKI9 464 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 FOXE1O00358 373 aaPredicted RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 PTPN4P29074 926 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 CNR2P34972 360 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 MNAT1P51948 309 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 REEP5Q00765 189 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 HHEXQ03014 270 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 SF1Q15637 639 aaKnown RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 AGKQ53H12 422 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 IL23RQ5VWK5 629 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 PAOXQ6QHF9 649 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 SNX32Q86XE0 403 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 OR2L3Q8NG85 312 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 SLC22A18Q96BI1 424 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 PITHD1Q9GZP4 211 aaPredicted RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 LRMDAQ9H2I8 198 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 SNX11Q9Y5W9 270 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 TP53BP1Q12888 1972 aaPredicted RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 FAM221BA6H8Z2 402 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 CYLC2Q14093 348 aaPredicted RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 KIR2DS3Q14952 304 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 KIAA0040Q15053 153 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 PDCD4Q53EL6 469 aaKnown RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 TMEM26Q6ZUK4 368 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 CEP68Q76N32 757 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 AVL9Q8NBF6 648 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 NT5DC2Q9H857 520 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 CCDC167Q9P0B6 97 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 VPS29Q9UBQ0 182 aa29.27■■■□□ 2.28
CCM2-219ENST00000544363 EIF3LQ9Y262 564 aaKnown RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 POLR3HQ9Y535 204 aaPredicted RBP29.27■■■□□ 2.28
CCM2-219ENST00000544363 BDP1A6H8Y1 2624 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 SDK1Q7Z5N4 2213 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 IGKV1-8A0A0C4DH67 115 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 SDC3O75056 442 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 DNAJC8O75937 253 aaPredicted RBP29.26■■■□□ 2.27
CCM2-219ENST00000544363 ANXA6P08133 673 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 CMPK1P30085 196 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 CSNK1G2P78368 415 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 BNC1Q01954 994 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 MAPRE2Q15555 327 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 ZNF528Q3MIS6 628 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 RINLQ6ZS11 566 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 ASIC5Q9NY37 505 aa29.26■■■□□ 2.27
CCM2-219ENST00000544363 RRP15Q9Y3B9 282 aaKnown RBP29.26■■■□□ 2.27
CCM2-219ENST00000544363 B2RBV5 119 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 EZRP15311 586 aaKnown RBP29.25■■■□□ 2.27
CCM2-219ENST00000544363 PIK3CBP42338 1070 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 NME5P56597 212 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 RPS13P62277 151 aaKnown RBP29.25■■■□□ 2.27
CCM2-219ENST00000544363 RBBP5Q15291 538 aaKnown RBP29.25■■■□□ 2.27
CCM2-219ENST00000544363 ZNF423Q2M1K9 1284 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 GK5Q6ZS86 529 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 PARP9Q8IXQ6 854 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 OR9I1Q8NGQ6 314 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 PRM3Q9NNZ6 103 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 SLC6A20Q9NP91 592 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 TMEM184CQ9NVA4 438 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 UCKL1Q9NWZ5 548 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 ZSCAN32Q9NX65 697 aa29.25■■■□□ 2.27
CCM2-219ENST00000544363 OR6C74A6NCV1 312 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 G6PDP11413 515 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 HRH2P25021 359 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 AVPR2P30518 371 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 MAZP56270 477 aaKnown RBP29.24■■■□□ 2.27
CCM2-219ENST00000544363 PHEXP78562 749 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 FUNDC1Q8IVP5 155 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 FAM20CQ8IXL6 584 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 PIGKQ92643 395 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 APIPQ96GX9 242 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 RHBGQ9H310 441 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 DMRT3Q9NQL9 472 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 ZIM2Q9NZV7 527 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 ADGRE2Q9UHX3 823 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 TMED5Q9Y3A6 229 aa29.24■■■□□ 2.27
CCM2-219ENST00000544363 NOBOXO60393 691 aa29.23■■■□□ 2.27
CCM2-219ENST00000544363 AMD1P17707 334 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms