RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 GTF2E2P29084 291 aaKnown RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ARSFP54793 590 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 MGAT3Q09327 533 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 KRR1Q13601 381 aaKnown RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF273Q14593 569 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 DUSP6Q16828 381 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 TYSND1Q2T9J0 566 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 C2orf27AQ580R0 203 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 RABGAP1LQ5R372 815 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 BTLAQ7Z6A9 289 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 SLC35F3Q8IY50 421 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 SLC25A41Q8N5S1 370 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 KIAA0895Q8NCT3 520 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 OR52H1Q8NGJ2 320 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 PTERQ96BW5 349 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 C12orf43Q96C57 262 aaKnown RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 TEKT3Q9BXF9 490 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 POLDIP3Q9BY77 421 aaKnown RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 PITPNM3Q9BZ71 974 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 NMUR2Q9GZQ4 415 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ESRP2Q9H6T0 727 aaKnown RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 MS4A12Q9NXJ0 267 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 CDC14AQ9UNH5 594 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 PLA2G4CQ9UP65 541 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 NDUFAF1Q9Y375 327 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 C10orf71Q711Q0 1435 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 CDC7O00311 574 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ABCD4O14678 606 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ACOX3O15254 700 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 TOX3O15405 576 aaPredicted RBP8.66□□□□□ -1.02
VPS13D-212ENST00000543766 CKMP06732 381 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ARL3P36405 182 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 NFATC4Q14934 902 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 OXA1LQ15070 435 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 INAVAQ3KP66 663 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 BCL7AQ4VC05 210 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 PKDCCQ504Y2 493 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ATG9BQ674R7 924 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 RNF111Q6ZNA4 994 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 ADGRF4Q8IZF3 695 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 SPAG16Q8N0X2 631 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 CHURC1Q8WUH1 139 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 RAD9AQ99638 391 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 NPAS1Q99742 590 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 CACNG6Q9BXT2 260 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 PEX16Q9Y5Y5 336 aa8.66□□□□□ -1.02
VPS13D-212ENST00000543766 A0A0U1RQV5 110 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 IQCF5A8MTL0 148 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 TCF21O43680 179 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CRCPO75575 148 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CXCL14O95715 111 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 SMPD1P17405 629 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 HPCAL1P37235 193 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 GPC5P78333 572 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 TROAPQ12815 778 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 ALKBH6Q3KRA9 238 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 SPOUT1Q5T280 376 aaKnown RBP8.65□□□□□ -1.02
VPS13D-212ENST00000543766 SLX4IPQ5VYV7 408 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CIAPIN1Q6FI81 312 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 METAP1DQ6UB28 335 aaPredicted RBP8.65□□□□□ -1.02
VPS13D-212ENST00000543766 SCARA5Q6ZMJ2 495 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF720Q7Z2F6 126 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 ERASQ7Z444 233 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 SLITRK4Q8IW52 837 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 RCOR2Q8IZ40 523 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 TSPAN14Q8NG11 270 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 PSMA8Q8TAA3 256 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 APBB2Q92870 758 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 RCC1LQ96I51 464 aaKnown RBP8.65□□□□□ -1.02
VPS13D-212ENST00000543766 C1orf50Q9BV19 199 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 MAGEH1Q9H213 219 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 GANQ9H2C0 597 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 GOLPH3Q9H4A6 298 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 HCFC1R1Q9NWW0 138 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
VPS13D-212ENST00000543766 GNG8Q9UK08 70 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CDH9Q9ULB4 789 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 TFECO14948 347 aaPredicted RBP8.65□□□□□ -1.02
VPS13D-212ENST00000543766 IFNA6P05013 189 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 PRKCGP05129 697 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 FAM58BPP0C7Q3 252 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CETPP11597 493 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 ERCC2P18074 760 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 SSTR2P30874 369 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CLCN7P51798 805 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 MAP2K6P52564 334 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 OR2B6P58173 313 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF91Q05481 1191 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF235Q14590 738 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF174Q15697 407 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 TBCCQ15814 346 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 NRF1Q16656 503 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 VASNQ6EMK4 673 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CYFIP1Q7L576 1253 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 IRF2BP2Q7Z5L9 587 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 FBXO11Q86XK2 927 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 LINC00346Q8IVM7 164 aa8.65□□□□□ -1.02
VPS13D-212ENST00000543766 CLRN3Q8NCR9 226 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms