RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CCDC88AQ3V6T2 1871 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 A0A087WXM4 84 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 TRIM43BA6NCK2 446 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PRORSD1PA6NEY8 169 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 EFCAB10A6NFE3 127 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 IGLON5A6NGN9 336 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM170BA6NMN3 283 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF487B1APH4 448 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 TMEM189-UBE2V1I3L0A0 370 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 LDB2O43679 373 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PAPSS2O95340 614 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PGRP06401 933 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 SBK2P0C263 348 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 DNAJB1P25685 340 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 SP140Q13342 867 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 TOR1AIP1Q5JTV8 583 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PDZK1Q5T2W1 519 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 KIAA1161Q6NSJ0 714 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 TNFAIP8L2Q6P589 184 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM92BQ6ZTR7 304 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 RTL10Q7L3V2 364 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 THAP5Q7Z6K1 395 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 TRAM1L1Q8N609 369 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 TTC9BQ8N6N2 239 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PQLC3Q8N755 202 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF781Q8N8C0 355 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 OR8H1Q8NGG4 311 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PSMA8Q8TAA3 256 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 FIBINQ8TAL6 211 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC5A11Q8WWX8 675 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 KLHL6Q8WZ60 621 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 CASD1Q96PB1 797 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 DGCR6LQ9BY27 220 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 C6orf62Q9GZU0 229 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PCDH10Q9P2E7 1040 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 FETUBQ9UGM5 382 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PCDHGA2Q9Y5H1 932 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ALS2Q96Q42 1657 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 MID1O15344 667 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 SIX3O95343 332 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 MED26O95402 600 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 IMPDH1P20839 514 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 AHCYP23526 432 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 VAMP1P23763 118 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 DCST1Q5T197 706 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 NIPAL1Q6NVV3 410 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PTCHD4Q6ZW05 846 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ATCAYQ86WG3 371 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF540Q8NDQ6 660 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNJ9Q92806 393 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 CHCHD6Q9BRQ6 235 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNH6Q9H252 994 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 IL21RQ9HBE5 538 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 HCFC1R1Q9NWW0 138 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 MOCS1Q9NZB8 636 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 KLRF1Q9NZS2 232 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 LGALS13Q9UHV8 139 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 OGDHLQ9ULD0 1010 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 RIIAD1A6NNX1 92 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 HCN1O60741 890 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 DNAJA2O60884 412 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF37AP17032 561 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 CTSKP43235 329 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNJ5P48544 419 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 HMGCS1Q01581 520 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 SNTA1Q13424 505 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF542PQ5EBM4 170 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 VWA5B1Q5TIE3 1220 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 B3GNT6Q6ZMB0 384 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 AMIGO2Q86SJ2 522 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 C1orf52Q8N6N3 182 aaKnown RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 OR4K17Q8NGC6 315 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 EEF1AKMT1Q8WVE0 214 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 DDX1Q92499 740 aaKnown RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 RFKQ969G6 155 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 RBM14Q96PK6 669 aaKnown RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 CDK15Q96Q40 435 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 NMUR2Q9GZQ4 415 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 HSD3B7Q9H2F3 369 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 Q9N2J8 555 aa6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 NLE1Q9NVX2 485 aaPredicted RBP6.71□□□□□ -1.34
SRGAP1-206ENST00000543397 LOC100506127A0A0U1RQW1 187 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM72CH0Y354 149 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ECDO95905 644 aaPredicted RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 BCL10O95999 233 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 STATHP02808 62 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 RCVRNP35243 200 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PDX1P52945 283 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 RHAGQ02094 409 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 LRRC26Q2I0M4 334 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 NDUFAF6Q330K2 333 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM72AQ5TYM5 149 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM72DQ6L9T8 149 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ZC3HC1Q86WB0 502 aaKnown RBP6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM72BQ86X60 149 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 CNTD1Q8N815 330 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 PIGXQ8TBF5 258 aa6.7□□□□□ -1.34
SRGAP1-206ENST00000543397 ZC3H10Q96K80 434 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms