RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TBC1D19Q8N5T2 526 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 OR4K1Q8NGD4 311 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 WDR34Q96EX3 536 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 ZNF382Q96SR6 550 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 AIF1LQ9BQI0 150 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 CHRNA10Q9GZZ6 450 aa22.2■■□□□ 1.15
HOMER3-205ENST00000542541 IGHV5-51A0A0C4DH38 117 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 IGKV1-8A0A0C4DH67 115 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 OR7A17O14581 309 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 WFS1O76024 890 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 CLDN9O95484 217 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 EBLN1P0CF75 366 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 TSPAN8P19075 237 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 HSD11B2P80365 405 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 ZFP36L1Q07352 338 aaKnown RBP22.2■■□□□ 1.14
HOMER3-205ENST00000542541 DOC2AQ14183 400 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 HIST2H2ACQ16777 129 aaPredicted RBP22.2■■□□□ 1.14
HOMER3-205ENST00000542541 PHF19Q5T6S3 580 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 HIST2H2AA3Q6FI13 130 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 ZNF425Q6IV72 752 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 ARHGAP22Q7Z5H3 698 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 KRT78Q8N1N4 520 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 C19orf47Q8N9M1 422 aaKnown RBP22.2■■□□□ 1.14
HOMER3-205ENST00000542541 OR52B6Q8NGF0 335 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 KLHL6Q8WZ60 621 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 CCDC74BQ96LY2 380 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 PITHD1Q9GZP4 211 aaPredicted RBP22.2■■□□□ 1.14
HOMER3-205ENST00000542541 KLHL25Q9H0H3 589 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 ZNF768Q9H5H4 540 aaKnown RBP22.2■■□□□ 1.14
HOMER3-205ENST00000542541 PDE7BQ9NP56 450 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 SOHLH2Q9NX45 425 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 KLHL20Q9Y2M5 609 aa22.2■■□□□ 1.14
HOMER3-205ENST00000542541 PCM1Q15154 2024 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 OR2A25A4D2G3 310 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 KLF11O14901 512 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 EZRP15311 586 aaKnown RBP22.19■■□□□ 1.14
HOMER3-205ENST00000542541 HNF4AP41235 474 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 INHBCP55103 352 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 CSNK1G2P78368 415 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 E2F2Q14209 437 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 CDCP2Q5VXM1 449 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 GPRIN3Q6ZVF9 776 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 MYLK4Q86YV6 388 aaPredicted RBP22.19■■□□□ 1.14
HOMER3-205ENST00000542541 HOMEZQ8IX15 550 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 SLC41A2Q96JW4 573 aa22.19■■□□□ 1.14
HOMER3-205ENST00000542541 DCHS1Q96JQ0 3298 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 ESRRBO95718 433 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 MT-CO3P00414 261 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 CCKBRP32239 447 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 SEPHS1P49903 392 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 ABCE1P61221 599 aaKnown RBP22.18■■□□□ 1.14
HOMER3-205ENST00000542541 TRAF3Q13114 568 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 ARL13AQ5H913 290 aaPredicted RBP22.18■■□□□ 1.14
HOMER3-205ENST00000542541 ZC3H12BQ5HYM0 836 aaKnown RBP22.18■■□□□ 1.14
HOMER3-205ENST00000542541 TMTC4Q5T4D3 741 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 FCRL6Q6DN72 434 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 PAQR7Q86WK9 346 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 FAM129CQ86XR2 697 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 L3MBTL4Q8NA19 623 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 LRRC8CQ8TDW0 803 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 ZNF75CPQ92670 426 aaPredicted RBP22.18■■□□□ 1.14
HOMER3-205ENST00000542541 UBE2E3Q969T4 207 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 GRAMD1AQ96CP6 724 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 DEPDC7Q96QD5 511 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 STRADBQ9C0K7 418 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 MID1IP1Q9NPA3 183 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 FAM53CQ9NYF3 392 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 AKAP7Q9P0M2 348 aaPredicted RBP22.18■■□□□ 1.14
HOMER3-205ENST00000542541 BTRCQ9Y297 605 aa22.18■■□□□ 1.14
HOMER3-205ENST00000542541 PPP6CO00743 305 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 HSPA4LO95757 839 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 NELFEP18615 380 aaKnown RBP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 VARSP26640 1264 aaKnown RBP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 SLC1A6P48664 564 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 BST1Q10588 318 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 OR4F6Q8NGB9 312 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 CKAP2Q8WWK9 683 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 MAGEB18Q96M61 343 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 GEMIN8Q9NWZ8 242 aaKnown RBP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 CLCA2Q9UQC9 943 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 HGSO14964 777 aaPredicted RBP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 PRAMEF4O60810 478 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 JUPP14923 745 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 CSTF2P33240 577 aaKnown RBP eCLIP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 MLLT3P42568 568 aaPredicted RBP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 RPS15AP62244 130 aaKnown RBP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 SH3BP2P78314 561 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 SLBPQ14493 270 aaKnown RBP eCLIP22.17■■□□□ 1.14
HOMER3-205ENST00000542541 GGTA1PQ4G0N0 100 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 PRAMEF9Q5VWM5 478 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 GRHL2Q6ISB3 625 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 CACTIN-AS1Q8N1I8 211 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 AGAP11Q8TF27 550 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 CDK15Q96Q40 435 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 NT5DC2Q9H857 520 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 THAP1Q9NVV9 213 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 DLL3Q9NYJ7 618 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 TRPS1Q9UHF7 1281 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 RNF11Q9Y3C5 154 aa22.17■■□□□ 1.14
HOMER3-205ENST00000542541 TRBC2A0A5B9 178 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms