RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 MSL3P1P0C860 447 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 C1GALT1C1LP0DN25 315 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 ALDH3A1P30838 453 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 GRK3P35626 688 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 SERPINB4P48594 390 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 NAGLUP54802 743 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 CSNK1G2P78368 415 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 FOXC1Q12948 553 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 XKR6Q5GH73 641 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 ZC3H12BQ5HYM0 836 aaKnown RBP16.43■□□□□ 0.22
LIG1-204ENST00000542460 FAM129CQ86XR2 697 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 DNAJC22Q8N4W6 341 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 CCNYL1Q8N7R7 359 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 WDR36Q8NI36 951 aaKnown RBP16.43■□□□□ 0.22
LIG1-204ENST00000542460 ATP6V1E2Q96A05 226 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 NSUN5Q96P11 429 aaKnown RBP16.43■□□□□ 0.22
LIG1-204ENST00000542460 MECRQ9BV79 373 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 NOL11Q9H8H0 719 aaKnown RBP16.43■□□□□ 0.22
LIG1-204ENST00000542460 OCIAD1Q9NX40 245 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 LOXL2Q9Y4K0 774 aa16.43■□□□□ 0.22
LIG1-204ENST00000542460 AGRPO00253 132 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 PLD2O14939 933 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 CTSVO60911 334 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 WFS1O76024 890 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 EBLN1P0CF75 366 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 FOLR1P15328 257 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 CXCR2P25025 360 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 CASP2P42575 452 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 SH3BP2P78314 561 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 IRF8Q02556 426 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 ACY1Q03154 408 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 CLCQ05315 142 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 CHIT1Q13231 466 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 KCNAB1Q14722 419 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 TBCCQ15814 346 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 CFAP157Q5JU67 520 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 HHATQ5VTY9 493 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 FBXO42Q6P3S6 717 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 CYB5D1Q6P9G0 228 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 NUDCD3Q8IVD9 361 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 WDR34Q96EX3 536 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 PTCD3Q96EY7 689 aaKnown RBP16.42■□□□□ 0.22
LIG1-204ENST00000542460 ZFYVE21Q9BQ24 234 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 AIF1LQ9BQI0 150 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 EFCAB11Q9BUY7 163 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 ZBTB26Q9HCK0 441 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 SEMA4BQ9NPR2 832 aaPredicted RBP16.42■□□□□ 0.22
LIG1-204ENST00000542460 SIDT1Q9NXL6 827 aaKnown RBP16.42■□□□□ 0.22
LIG1-204ENST00000542460 PILRAQ9UKJ1 303 aa16.42■□□□□ 0.22
LIG1-204ENST00000542460 B4E171 279 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 HAT1O14929 419 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 NRP2O60462 931 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 JMJD7P0C870 316 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 FGF3P11487 239 aaPredicted RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 CCL4P13236 92 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 VARSP26640 1264 aaKnown RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 TSPAN7P41732 249 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 CCNG1P51959 295 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 CDH13P55290 713 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 RPS15AP62244 130 aaKnown RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 MEF2AQ02078 507 aaPredicted RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 FOXM1Q08050 763 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 LAPTM5Q13571 262 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 DOC2AQ14183 400 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 E2F2Q14209 437 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 RPS27LQ71UM5 84 aaKnown RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 RNF44Q7L0R7 432 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 BPHLQ86WA6 291 aaPredicted RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 MARCH9Q86YJ5 346 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 TBC1D19Q8N5T2 526 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 BMPERQ8N8U9 685 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 TRPC4APQ8TEL6 797 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 N4BP2L2Q92802 583 aaPredicted RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 MOCOSQ96EN8 888 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 PAIP2Q9BPZ3 127 aaKnown RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 NTMT1Q9BV86 223 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 SARGQ9BW04 601 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 PITHD1Q9GZP4 211 aaPredicted RBP16.41■□□□□ 0.22
LIG1-204ENST00000542460 ACTR8Q9H981 624 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 FANCEQ9HB96 536 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 MLXIPLQ9NP71 852 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 ACSS2Q9NR19 701 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 FBXO8Q9NRD0 319 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 FGF21Q9NSA1 209 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 PLCL2Q9UPR0 1127 aa16.41■□□□□ 0.22
LIG1-204ENST00000542460 KCNE1BA0A087WTH5 132 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 A0A0J9YVX5 310 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 OR7A17O14581 309 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 SRPX2O60687 465 aaPredicted RBP16.4■□□□□ 0.22
LIG1-204ENST00000542460 UGDHO60701 494 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 PRAMEF4O60810 478 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 MLYCDO95822 493 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 OTCP00480 354 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 GABRA4P48169 554 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 WDR4P57081 412 aaKnown RBP16.4■□□□□ 0.22
LIG1-204ENST00000542460 PPP2R2AP63151 447 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 MC2RQ01718 297 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 TUBB3Q13509 450 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 IL11RAQ14626 422 aa16.4■□□□□ 0.22
LIG1-204ENST00000542460 RBBP7Q16576 425 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms