RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 GNAZP19086 355 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 CD22P20273 847 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 HSD17B2P37059 387 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 CORO7P57737 925 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 NAA25Q14CX7 972 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 CYP2A13Q16696 494 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 C14orf28Q4W4Y0 310 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 USP7Q93009 1102 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 NEIL2Q969S2 332 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 MVB12BQ9H7P6 319 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 CPNE7Q9UBL6 633 aa26.79■■□□□ 1.88
CCM2-218ENST00000541586 ZNF490Q9ULM2 529 aaPredicted RBP26.79■■□□□ 1.88
CCM2-218ENST00000541586 KIR2DS5A0A0G2JLQ3 304 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 A0A0G2JNG1 304 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 KIR2DS3K7RE56 304 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 SLC22A2O15244 555 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 HNRNPCL1O60812 293 aaKnown RBP26.78■■□□□ 1.88
CCM2-218ENST00000541586 VIPP01282 170 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 KRT6AP02538 564 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 KRT6BP04259 564 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 MTHFD1P11586 935 aaKnown RBP26.78■■□□□ 1.88
CCM2-218ENST00000541586 JUPP14923 745 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 PIK3R1P27986 724 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 ADSLP30566 484 aaPredicted RBP26.78■■□□□ 1.88
CCM2-218ENST00000541586 KRT6CP48668 564 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 DAB2P98082 770 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 DOC2AQ14183 400 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 KIR2DS5Q14953 304 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 ZRSR2Q15696 482 aaKnown RBP26.78■■□□□ 1.88
CCM2-218ENST00000541586 SGO1Q5FBB7 561 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 ASRGL1Q7L266 308 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 SLC9B2Q86UD5 537 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 C2orf73Q8N5S3 287 aaPredicted RBP26.78■■□□□ 1.88
CCM2-218ENST00000541586 CNDP2Q96KP4 475 aaKnown RBP26.78■■□□□ 1.88
CCM2-218ENST00000541586 MIPEPQ99797 713 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 PADI4Q9UM07 663 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 SNX6Q9UNH7 406 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 GVINP1Q7Z2Y8 2422 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 SPEGQ15772 3267 aa26.78■■□□□ 1.88
CCM2-218ENST00000541586 CPED1A4D0V7 1026 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 CCND1P24385 295 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 CPA2P48052 419 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 HHEXQ03014 270 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 NR0B2Q15466 257 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 OGFOD2Q6N063 350 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 POU5F2Q8N7G0 328 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 FAM181AQ8N9Y4 354 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 KLHL29Q96CT2 875 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 SH2B3Q9UQQ2 575 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 DYRK1BQ9Y463 629 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 CCL27Q9Y4X3 112 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 HEBP2Q9Y5Z4 205 aa26.77■■□□□ 1.88
CCM2-218ENST00000541586 DNAJC8O75937 253 aaPredicted RBP26.76■■□□□ 1.88
CCM2-218ENST00000541586 CD1EP15812 388 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 XRCC1P18887 633 aaPredicted RBP26.76■■□□□ 1.88
CCM2-218ENST00000541586 RASSF2P50749 326 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 SQLEQ14534 574 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 TRIM46Q7Z4K8 759 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 ZNF761Q86XN6 746 aaPredicted RBP26.76■■□□□ 1.88
CCM2-218ENST00000541586 NETO1Q8TDF5 533 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 MTFMTQ96DP5 389 aaKnown RBP26.76■■□□□ 1.88
CCM2-218ENST00000541586 CMTM5Q96DZ9 223 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 ELOVL6Q9H5J4 265 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 MRGBPQ9NV56 204 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 LRIT1Q9P2V4 623 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 FTSJ1Q9UET6 329 aa26.76■■□□□ 1.88
CCM2-218ENST00000541586 ZNF839A8K0R7 811 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 CASP2P42575 452 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 LIMK1P53667 647 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 ATP6AP1LQ52LC2 224 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 C6orf136Q5SQH8 315 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 THEMIS2Q5TEJ8 643 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 PRAMEF13Q5VWM6 474 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 SLCO4C1Q6ZQN7 724 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 LRMDAQ9H2I8 198 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 COLEC10Q9Y6Z7 277 aa26.76■■□□□ 1.87
CCM2-218ENST00000541586 CFAP54Q96N23 3096 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 SLC28A1O00337 649 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 LSM1O15116 133 aaKnown RBP26.75■■□□□ 1.87
CCM2-218ENST00000541586 PPM1DO15297 605 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 PDYNP01213 254 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 PRDX6P30041 224 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 ATP4BP51164 291 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 E2F2Q14209 437 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 NR6A1Q15406 480 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 GRHL2Q6ISB3 625 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 SPATA19Q7Z5L4 167 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 TMPRSS11BQ86T26 416 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 KIF2BQ8N4N8 673 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 RAB42Q8N4Z0 105 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 SELENOMQ8WWX9 145 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 RNF215Q9Y6U7 377 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 DMXL1Q9Y485 3027 aa26.75■■□□□ 1.87
CCM2-218ENST00000541586 LY6G6EA0A0G2JKS1 128 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 LOC100653049A0A140TA62 436 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 RHPN2P1A8MT19 583 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 RGS14O43566 566 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 KRT34O76011 436 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 COX4I1P13073 169 aa26.74■■□□□ 1.87
CCM2-218ENST00000541586 VARSP26640 1264 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms